YTHDC1 (Myotis lucifugus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSMLUG00000016300 T62065_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YTHDC1
M354_0.6 		Homo sapiens KVVURC SELEX
Cook et al.(2011)
969_20167602 		0.784
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000014861 YTH 384 480

Links

Other YTH family RBPs
Other Myotis lucifugus RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R018249 Ailuropoda melanoleuca Ame_R018249 I 0.794
YTHDC1 Anolis carolinensis ENSACAG00000009697 I 0.763
amel4_ncbi_hmm4222 Apis mellifera amel4_ncbi_hmm4222 I 0.000
Q29RQ7_BOVIN Bos taurus ENSBTAG00000015572 I 0.784
YTHDC1 Callithrix jacchus ENSCJAG00000009934 I 0.784
YTHDC1 Canis familiaris ENSCAFG00000002821 I 0.794
YTHDC1 Cavia porcellus ENSCPOG00000010929 I 0.784
ythdc1 Danio rerio ENSDARG00000051953 I 0.753
YTHDC1 Dasypus novemcinctus ENSDNOG00000004949 I 0.711
Ythdc1 Dipodomys ordii ENSDORG00000013045 I 0.784
LOC100066303 Equus caballus ENSECAG00000018303 I 0.794
YTHDC1 Erinaceus europaeus ENSEEUG00000015466 I 0.784
Q5F341_CHICK Gallus gallus ENSGALG00000011795 I 0.784
YTHDC1 Gasterosteus aculeatus ENSGACG00000015486 I 0.701
YTHDC1 Gorilla gorilla ENSGGOG00000021958 I 0.784
YTHDC1 Homo sapiens ENSG00000083896 D 0.784
YTHDC1 Loxodonta africana ENSLAFG00000021592 I 0.794
YTHDC1 Macaca mulatta ENSMMUG00000002265 I 0.784
YTHDC1 Meleagris gallopavo ENSMGAG00000010391 I 0.784
ENSMODG00000014337 Monodelphis domestica ENSMODG00000014337 I 0.701
ENSMODG00000010076 Monodelphis domestica ENSMODG00000010076 I 0.000
ENSMODG00000009173 Monodelphis domestica ENSMODG00000009173 I 0.000
ENSMODG00000004117 Monodelphis domestica ENSMODG00000004117 I 0.000
ENSMODG00000020754 Monodelphis domestica ENSMODG00000020754 I 0.711
Ythdc1 Mus musculus ENSMUSG00000035851 I 0.784
nasonia_NCBI_hmm460384 Nasonia vitripennis nasonia_NCBI_hmm460384 I 0.000
YTHDC1 Ochotona princeps ENSOPRG00000008986 I 0.784
YTHDC1 Ornithorhynchus anatinus ENSOANG00000014398 I 0.794
YTHDC1 Oryctolagus cuniculus ENSOCUG00000015886 I 0.794
YTHDC1 Otolemur garnettii ENSOGAG00000003362 I 0.794
YTHDC1 Pan troglodytes ENSPTRG00000016105 I 0.784
PHUM305930 Pediculus humanus PHUM305930 I 0.000
ENSPPYG00000014726 Pongo pygmaeus ENSPPYG00000014726 I 0.784
YTHDC1 Pteropus vampyrus ENSPVAG00000015551 I 0.784
Ythdc1 Rattus norvegicus ENSRNOG00000001996 I 0.784
YTHDC1 Sorex araneus ENSSARG00000010960 I 0.784
XP_783255.2 Strongylocentrotus purpuratus XP_783255.2 I 0.000
XP_001181366.1 Strongylocentrotus purpuratus XP_001181366.1 I 0.000
YTHDC1 Taeniopygia guttata ENSTGUG00000004452 I 0.784
YTHDC1 Takifugu rubripes ENSTRUG00000010142 I 0.701
YTHDC1 Tarsius syrichta ENSTSYG00000011668 I 0.763
YTHDC1 Tetraodon nigroviridis ENSTNIG00000013243 I 0.000
YTHDC1 Tupaia belangeri ENSTBEG00000011546 I 0.784
YTHDC1 Tursiops truncatus ENSTTRG00000005083 I 0.784
YTHDC1 Vicugna pacos ENSVPAG00000009040 I 0.784
AAH84321 Xenopus laevis AAH84321 I 0.742
ythdc1 Xenopus tropicalis ENSXETG00000017960 I 0.753