estExt_Genewise1Plus.C_chr_60126 (Mycosphaerella graminicola)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_Genewise1Plus.C_chr_60126 T05150_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_chr_60126 CCCH ZF 48 72
estExt_Genewise1Plus.C_chr_60126 CCCH ZF 77 99

Links

Other CCCH ZF family RBPs
Other Mycosphaerella graminicola RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_120231 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_120231 N 0.918
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.750
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.750
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.720
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.720
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.720
NCU05007 Neurospora crassa NCU05007 N 0.720
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.708
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.708
orf19.7385 Candida albicans orf19.7385 N 0.708
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.708
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.700
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.700
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.700
ADR062W Ashbya gossypii ADR062W N 0.700
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.700