estExt_fgenesh1_pg.C_120231 (Mycosphaerella fijiensis)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 estExt_fgenesh1_pg.C_120231 T04989_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_120231 CCCH ZF 82 106
estExt_fgenesh1_pg.C_120231 CCCH ZF 111 134

Links

Other CCCH ZF family RBPs
Other Mycosphaerella fijiensis RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_chr_60126 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_60126 N 0.918
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.720
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.720
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.700
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.700
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.700
NCU05007 Neurospora crassa NCU05007 N 0.700
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.700
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.700
GSTUMT00003772001 Tuber melanosporum GSTUMT00003772001 N 0.700
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.700
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.700
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.700
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.700
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.700