CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YBX1
(
Macropus eugenii
)
CSD
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00313 (CSD)
IPR002059
ENSMEUG00000009893
T16888_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000009010
CSD
1
44
NDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKXXX
Links
Other
CSD
family RBPs
Other
Macropus eugenii
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CSDA
Tursiops truncatus
ENSTTRG00000008045
I
0.804
YBOX1_RABIT
Oryctolagus cuniculus
ENSOCUG00000028047
I
0.788
ENSETEG00000004125
Echinops telfairi
ENSETEG00000004125
I
0.774
CSDA
Felis catus
ENSFCAG00000018959
I
0.774
YB-1
Homo sapiens
ENSG00000065978
D
0.774
YBX1
Procavia capensis
ENSPCAG00000008397
I
0.774
CSDA
Oryctolagus cuniculus
ENSOCUG00000001889
I
0.774
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
0.774
Ame_R019252
Ailuropoda melanoleuca
Ame_R019252
I
0.774
ENSSARG00000007896
Sorex araneus
ENSSARG00000007896
I
0.774
YBX2
Vicugna pacos
ENSVPAG00000003104
I
0.765
YBX2
Otolemur garnettii
ENSOGAG00000004392
I
0.765
YBX2
Microcebus murinus
ENSMICG00000012453
I
0.765
CSDA
Gorilla gorilla
ENSGGOG00000001352
I
0.759
Ame_R016025
Ailuropoda melanoleuca
Ame_R016025
I
0.759
CSDA
Spermophilus tridecemlineatus
ENSSTOG00000002108
I
0.755
YBX2
Loxodonta africana
ENSLAFG00000014006
I
0.709