ENSGGOG00000004758 (Gorilla gorilla)
CSD

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00313 (CSD) IPR002059 ENSGGOG00000004758 T16872_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
YB-1
M111_0.6 		Homo sapiens AACAUCD RNAcompete
Ray et al.(2013)
RNCMPT00116 		0.789
YB-1
M081_0.6 		Homo sapiens AACAUC RNAcompete
Ray et al.(2013)
RNCMPT00083 		0.789
ybx2-a
M260_0.6 		Xenopus laevis GCCANACCAYCGC SELEX
Cook et al.(2011)
130_11376140 		0.764
ybx2-a
M254_0.6 		Xenopus laevis KAACAUCU SELEX
Cook et al.(2011)
115_7499328 		0.764
ybx2-a
M250_0.6 		Xenopus laevis UAACAUC SELEX
Cook et al.(2011)
114_7499328 		0.764
YBX2
M082_0.6 		Homo sapiens AACAWCD RNAcompete
Ray et al.(2013)
RNCMPT00084 		0.736
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000004660 CSD 37 102
ENSGGOP00000021057 CSD 124 176

Links

Other CSD family RBPs
Other Gorilla gorilla RBPs

142 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YB-1 Homo sapiens ENSG00000065978 D 1.000
CSDA Oryctolagus cuniculus ENSOCUG00000001889 I 0.962
ENSETEG00000004125 Echinops telfairi ENSETEG00000004125 I 0.962
YBX1 Procavia capensis ENSPCAG00000008397 I 0.962
YBOX1_RABIT Oryctolagus cuniculus ENSOCUG00000028047 I 0.962
Ame_R019252 Ailuropoda melanoleuca Ame_R019252 I 0.962
CSDA Felis catus ENSFCAG00000018959 I 0.962
ENSSARG00000007896 Sorex araneus ENSSARG00000007896 I 0.962
CSDA Tursiops truncatus ENSTTRG00000008045 I 0.962
CSDA Gorilla gorilla ENSGGOG00000001352 I 0.944
Ame_R016025 Ailuropoda melanoleuca Ame_R016025 I 0.944
CSDA Spermophilus tridecemlineatus ENSSTOG00000002108 I 0.943
YBX2 Microcebus murinus ENSMICG00000012453 I 0.925
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.925
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.925
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.891
YBOX1_CHICK Gallus gallus ENSGALG00000004848 I 0.821
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 N 0.811
YBX2 Pteropus vampyrus ENSPVAG00000005050 N 0.811
YBX1 Felis catus ENSFCAG00000015376 N 0.811
YBX2 Oryctolagus cuniculus ENSOCUG00000015064 I 0.803
ENSOCUG00000022716 Oryctolagus cuniculus ENSOCUG00000022716 N 0.792
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.785
YBX1 Loxodonta africana ENSLAFG00000007597 I 0.783
CSDA Echinops telfairi ENSETEG00000002557 I 0.778
CSDA Homo sapiens ENSG00000060138 I 0.778
AAA49715 Xenopus laevis AAA49715 I 0.778
AAH41191 Xenopus laevis AAH41191 I 0.778
AAI06324 Xenopus laevis AAI06324 I 0.778
CSDA Erinaceus europaeus ENSEEUG00000010415 I 0.778
AAH42217 Xenopus laevis AAH42217 I 0.778
ybx1 Xenopus tropicalis ENSXETG00000013436 I 0.778
AAI30161 Xenopus laevis AAI30161 I 0.778
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.778
CSDA Taeniopygia guttata ENSTGUG00000012047 I 0.778
YBX1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.778
Q90WH2_FUGRU Takifugu rubripes ENSTRUG00000015333 I 0.778
CSDA Tupaia belangeri ENSTBEG00000012570 I 0.778
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.778
YBX1 Gasterosteus aculeatus ENSGACG00000006447 I 0.778
CAA42778 Xenopus laevis CAA42778 I 0.778
Q9N1Q2_CANFA Canis familiaris ENSCAFG00000013401 I 0.778
Csda Dipodomys ordii ENSDORG00000009103 I 0.778
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.778
ybx1 Danio rerio ENSDARG00000004757 I 0.778
CSDA Cavia porcellus ENSCPOG00000011329 I 0.778
LOC100396927 Callithrix jacchus ENSCJAG00000021660 I 0.778
LOC100401646 Callithrix jacchus ENSCJAG00000003155 I 0.778
CSDA Choloepus hoffmanni ENSCHOG00000011988 I 0.778
XP_856029.1 Canis familiaris ENSCAFG00000010117 I 0.778
LOC100065107 Equus caballus ENSECAG00000013777 I 0.778
Q00436 Xenopus laevis Q00436 I 0.778
ENSEEUG00000005657 Erinaceus europaeus ENSEEUG00000005657 I 0.778
P21573 Xenopus laevis P21573 I 0.778
A5D7Q4_BOVIN Bos taurus ENSBTAG00000009663 I 0.778
YBOX1_BOVIN Bos taurus ENSBTAG00000017368 I 0.778
LOC100067336 Equus caballus ENSECAG00000023592 I 0.778
ENSCAFG00000002541 Canis familiaris ENSCAFG00000002541 I 0.778
ENSCPOG00000010888 Cavia porcellus ENSCPOG00000010888 I 0.778
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.778
ENSPPYG00000004279 Pongo pygmaeus ENSPPYG00000004279 I 0.778
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.778
CSDA Pan troglodytes ENSPTRG00000004681 I 0.778
CSDA Myotis lucifugus ENSMLUG00000007476 I 0.778
CSDA Pteropus vampyrus ENSPVAG00000006740 I 0.778
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.778
Q8AXS2_ORYLA Oryzias latipes ENSORLG00000004225 I 0.778
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.778
Ybx1 Mus musculus ENSMUSG00000028639 I 0.778
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.778
Csda Mus musculus ENSMUSG00000030189 I 0.778
CSDA Macaca mulatta ENSMMUG00000022469 I 0.778
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.778
Csda Rattus norvegicus ENSRNOG00000005480 I 0.778
XR_021659.1 Pan troglodytes ENSPTRG00000000615 I 0.778
YBOX1_RAT Rattus norvegicus ENSRNOG00000030807 I 0.778
CSDA Loxodonta africana ENSLAFG00000017247 I 0.778
YBX1 Microcebus murinus ENSMICG00000014984 I 0.778
CSDA Sus scrofa ENSSSCG00000000633 I 0.778
ENSSTOG00000000116 Spermophilus tridecemlineatus ENSSTOG00000000116 I 0.778
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.778
ENSOCUG00000021258 Oryctolagus cuniculus ENSOCUG00000021258 N 0.774
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 N 0.774
YBX1 Macropus eugenii ENSMEUG00000009893 N 0.774
P21574 Xenopus laevis P21574 I 0.764
AAA49716 Xenopus laevis AAA49716 I 0.764
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.764
ENSCJAG00000032211 Callithrix jacchus ENSCJAG00000032211 I 0.764
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.764
ybx2-a Xenopus laevis AAI69706 D 0.764
CSDA Monodelphis domestica ENSMODG00000018248 I 0.764
ENSRNOG00000023786 Rattus norvegicus ENSRNOG00000023786 I 0.764
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.764
AAI55915 Xenopus laevis AAI55915 I 0.764
AAI69704 Xenopus laevis AAI69704 I 0.764
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.761
YBX1 Tupaia belangeri ENSTBEG00000015642 N 0.755
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.755
Ybx1 Dipodomys ordii ENSDORG00000016627 N 0.755
Ame_R016026 Ailuropoda melanoleuca Ame_R016026 N 0.755
YBX2 Procavia capensis ENSPCAG00000008019 I 0.750
YBX2 Macaca mulatta ENSMMUG00000022712 I 0.750
ENSBTAG00000006133 Bos taurus ENSBTAG00000006133 I 0.750
A5D7M4_BOVIN Bos taurus ENSBTAG00000009126 I 0.750
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.750
P45441 Xenopus laevis P45441 I 0.750
AAA49924 Xenopus laevis AAA49924 I 0.750
AAI55914 Xenopus laevis AAI55914 I 0.750
LOC100072964 Equus caballus ENSECAG00000009996 I 0.750
Ybx2 Mus musculus ENSMUSG00000018554 I 0.750
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.750
YBX2 Sus scrofa ENSSSCG00000017938 I 0.750
YBX2 Canis familiaris ENSCAFG00000016128 I 0.750
csda Xenopus tropicalis ENSXETG00000016239 I 0.750
ENSRNOG00000006596 Rattus norvegicus ENSRNOG00000006596 I 0.750
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.750
ENSEEUG00000007494 Erinaceus europaeus ENSEEUG00000007494 I 0.750
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.750
LOC100403904 Callithrix jacchus ENSCJAG00000016581 I 0.750
ENSMLUG00000004747 Myotis lucifugus ENSMLUG00000004747 I 0.750
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.750
gw1.79.157.1 Lottia gigantea gw1.79.157.1 I 0.746
YBX2 Homo sapiens ENSG00000006047 D 0.736
ENSCAFG00000000872 Canis familiaris ENSCAFG00000000872 I 0.736
XR_022686.1 Pan troglodytes ENSPTRG00000008673 I 0.736
Ybx1 Rattus norvegicus ENSRNOG00000032902 I 0.736
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.736
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.736
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.736
YBX2 Sorex araneus ENSSARG00000000488 I 0.736
ENSCJAG00000033824 Callithrix jacchus ENSCJAG00000033824 I 0.732
ENSRNOG00000043268 Rattus norvegicus ENSRNOG00000043268 I 0.732
ENSSSCG00000008860 Sus scrofa ENSSSCG00000008860 I 0.722
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.722
ENSSSCG00000015308 Sus scrofa ENSSSCG00000015308 I 0.718
estExt_Genewise1Plus.C_1630040 Capitella teleta estExt_Genewise1Plus.C_1630040 I 0.718
ENSCJAG00000007407 Callithrix jacchus ENSCJAG00000007407 I 0.718
YBX2 Myotis lucifugus ENSMLUG00000004686 I 0.718
ENSCJAG00000018832 Callithrix jacchus ENSCJAG00000018832 I 0.718
ybx2 Xenopus tropicalis ENSXETG00000025267 N 0.717
CSDA Procavia capensis ENSPCAG00000001397 I 0.708