CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SJAG_00657
(
Schizosaccharomyces japonicus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
SJAG_00657
T17810_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SJAG_00657T0
KH
153
205
KRRQRLIGNNGQTLKALELLTQCYILVQGTTVAAMGGFKGLKEVRRVVIDCMN
Links
Other
KH
family RBPs
Other
Schizosaccharomyces japonicus
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.800
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.774
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.774
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.774
KRR1
Candida albicans
orf19.661
N
0.774
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.774
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.745
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.745
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.745
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.745
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.745
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.745
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.745
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.745
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.737
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.736
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.736
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.727
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.727
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.727
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.722
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.709
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.709
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.709
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.709
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.709
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.709
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.709
GSTUMT00008009001
Tuber melanosporum
GSTUMT00008009001
N
0.707
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.707
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.702