CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_002158002.1
(
Hydra magnipapillata
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
XP_002158002.1
T22059_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002158002.1
KH
154
201
KRRQRLIGPNGATLKALELLTECYILVQGGTVSAIGSFKGLKQVRNVV
Links
Other
KH
family RBPs
Other
Hydra magnipapillata
RBPs
121 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_002154857.1
Hydra magnipapillata
XP_002154857.1
N
0.896
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.833
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.833
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.833
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.833
KRR1
Candida albicans
orf19.661
N
0.833
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.820
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.820
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.820
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.800
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.800
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.800
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.800
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.800
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.800
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.800
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.800
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.800
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.792
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.780
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.780
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.780
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.780
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.780
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.780
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.780
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.780
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.780
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.780
KRR1
Homo sapiens
ENSG00000111615
N
0.780
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.780
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.780
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.780
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.780
KRR1
Sorex araneus
ENSSARG00000009967
N
0.780
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.780
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.780
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.780
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.780
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.780
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.780
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.780
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.780
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.780
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.780
KRR1
Felis catus
ENSFCAG00000005207
N
0.780
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.771
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.771
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.760
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.760
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.760
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.760
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.760
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.760
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.760
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.760
THAPSDRAFT_268598
Thalassiosira pseudonana
Thaps268598
N
0.760
PK22510.1
Cannabis sativa
PK22510.1
N
0.760
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.760
Krr1
Mus musculus
ENSMUSG00000063334
N
0.760
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.760
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.760
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.760
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.760
TP02_0631
Theileria parva
TP02_0631
N
0.755
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.755
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.755
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.750
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.745
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.745
Aqu1.217752
Amphimedon queenslandica
Aqu1.217752
N
0.745
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.745
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.745
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.740
AGAP007912
Anopheles gambiae
AGAP007912
N
0.740
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.740
KRR1
Danio rerio
ENSDARG00000011246
N
0.740
dbe
Drosophila melanogaster
FBgn0020305
N
0.740
MDP0000130613
Malus x domestica
MDP0000130613
N
0.740
MDP0000221204
Malus x domestica
MDP0000221204
N
0.740
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.740
GE15854
Drosophila yakuba
FBgn0233416
N
0.740
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.740
GK24616
Drosophila willistoni
FBgn0226576
N
0.740
GJ19628
Drosophila virilis
FBgn0206770
N
0.740
GL18627
Drosophila persimilis
FBgn0156228
N
0.740
GI18007
Drosophila mojavensis
FBgn0140747
N
0.740
GG24622
Drosophila erecta
FBgn0116754
N
0.740
SJAG_00657
Schizosaccharomyces japonicus
SJAG_00657
N
0.736
Chro.30334
Cryptosporidium hominis
Chro.30334
N
0.735
cgd3_2950
Cryptosporidium parvum
cgd3_2950
N
0.735
EDO06615.1
Babesia bovis
EDO06615.1
N
0.729
CMR456C
Cyanidioschyzon merolae
CMR456C
N
0.729
3707.m00252
Tetrahymena thermophila
3707.m00252
N
0.729
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.720
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.720
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.720
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.720
KRR1
Myotis lucifugus
ENSMLUG00000002339
N
0.714
AMSG_07403
Thecamonas trahens
AMSG_07403
N
0.714
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.706
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.706
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.700
NCU07041
Neurospora crassa
NCU07041
N
0.700
KRR1
Procavia capensis
ENSPCAG00000010269
N
0.700
KRR1
Microcebus murinus
ENSMICG00000015127
N
0.700
Pa_1_24010
Podospora anserina
Pa_1_24010
N
0.700
ENSETEG00000001656
Echinops telfairi
ENSETEG00000001656
N
0.700
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.700
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.700
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.700
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.700
UM03241
Ustilago maydis
UM03241
N
0.700
estExt_Genewise1Plus.C_120457
Neurospora discreta
estExt_Genewise1Plus.C_120457
N
0.700
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.700
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.700
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.700
estExt_Genewise1.C_250056
Neurospora tetrasperma
estExt_Genewise1.C_250056
N
0.700
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.700
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.700
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.700