CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Kwal_13011
(
Kluyveromyces waltii
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Kwal_13011
T21771_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Kwal_13011
KH
138
187
FVKRRQRLVGPNGNTLKALELLSKCYILVQGNTVSAMGPFKGLKEVRRVV
Links
Other
KH
family RBPs
Other
Kluyveromyces waltii
RBPs
149 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.980
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.980
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.980
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.980
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.980
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.980
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.980
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.940
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.940
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.940
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.940
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.940
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.940
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.940
KRR1
Candida albicans
orf19.661
N
0.940
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.940
KLTH0F00506g
Kluyveromyces thermotolerans
KLTH0F00506g
N
0.925
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.900
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.885
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.882
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.880
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.880
PMAA_048600
Penicillium marneffei
PMAA_048600
N
0.860
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.840
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.840
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.840
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.840
e_gw1.35.542.1
Selaginella moellendorfii
e_gw1.35.542.1
N
0.824
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.820
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.820
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.820
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.820
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.820
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.820
KRR1
Homo sapiens
ENSG00000111615
N
0.820
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.820
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.820
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.820
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.820
estExt_Genewise1.C_250056
Neurospora tetrasperma
estExt_Genewise1.C_250056
N
0.820
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.820
KRR1
Felis catus
ENSFCAG00000005207
N
0.820
estExt_Genewise1Plus.C_120457
Neurospora discreta
estExt_Genewise1Plus.C_120457
N
0.820
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.820
NCU07041
Neurospora crassa
NCU07041
N
0.820
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.820
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.820
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.820
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.820
KRR1
Sorex araneus
ENSSARG00000009967
N
0.820
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.820
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.820
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.820
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.820
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.820
ATEG_01441
Aspergillus terreus
CADATEAG00000360
N
0.820
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.820
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.820
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.820
Pa_1_24010
Podospora anserina
Pa_1_24010
N
0.820
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.820
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.820
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.820
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.800
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.800
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.800
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.800
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.800
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.800
estExt_fgenesh2_pm.C_40064
Thielavia terrestris
estExt_fgenesh2_pm.C_40064
N
0.800
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.800
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.800
fgenesh1_pm.00866_#_279
Aspergillus carbonarius
fgenesh1_pm.00866_#_279
N
0.800
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.800
Krr1
Mus musculus
ENSMUSG00000063334
N
0.800
KRR1
Danio rerio
ENSDARG00000011246
N
0.800
estExt_Genewise1.C_80450
Myceliophthora thermophila
estExt_Genewise1.C_80450
N
0.800
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.800
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.800
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.784
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.784
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.784
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.784
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.780
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.780
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.780
UM03241
Ustilago maydis
UM03241
N
0.780
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.780
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.780
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.780
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.780
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.780
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.780
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.780
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.780
YALI0F30393g
Yarrowia lipolytica
YALI0F30393g
N
0.780
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.780
MDP0000221204
Malus x domestica
MDP0000221204
N
0.760
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.760
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.760
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.760
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.760
TGME49_062070
Toxoplasma gondii
TGME49_062070
N
0.760
NCLIV_025560
Neospora caninum
NCLIV_025560
N
0.760
PK22510.1
Cannabis sativa
PK22510.1
N
0.760
MDP0000130613
Malus x domestica
MDP0000130613
N
0.760
TGGT1_008040
Toxoplasma gondii
TGGT1_008040
N
0.760
TGVEG_072780
Toxoplasma gondii
TGVEG_072780
N
0.760
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.760
GI18007
Drosophila mojavensis
FBgn0140747
N
0.740
GG24622
Drosophila erecta
FBgn0116754
N
0.740
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.740
dbe
Drosophila melanogaster
FBgn0020305
N
0.740
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.740
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.740
KRR1
Procavia capensis
ENSPCAG00000010269
N
0.740
KRR1
Microcebus murinus
ENSMICG00000015127
N
0.740
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.740
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.740
GJ19628
Drosophila virilis
FBgn0206770
N
0.740
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.740
AGAP007912
Anopheles gambiae
AGAP007912
N
0.740
GL18627
Drosophila persimilis
FBgn0156228
N
0.740
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.740
THAPSDRAFT_268598
Thalassiosira pseudonana
Thaps268598
N
0.740
ENSETEG00000001656
Echinops telfairi
ENSETEG00000001656
N
0.740
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.740
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.740
GE15854
Drosophila yakuba
FBgn0233416
N
0.740
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.740
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.740
GK24616
Drosophila willistoni
FBgn0226576
N
0.740
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.740
SJAG_00657
Schizosaccharomyces japonicus
SJAG_00657
N
0.727
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.725
Aqu1.217752
Amphimedon queenslandica
Aqu1.217752
N
0.725
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.725
FVEG_06170
Fusarium verticillioides
FVEG_06170
N
0.722
cgd3_2950
Cryptosporidium parvum
cgd3_2950
N
0.720
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.720
Chro.30334
Cryptosporidium hominis
Chro.30334
N
0.720
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.719
ANIA_05875
Aspergillus nidulans
CADANIAG00007161
N
0.719
GSTUMT00008009001
Tuber melanosporum
GSTUMT00008009001
N
0.707
An02g03350
Aspergillus niger
CADANGAG00001848
N
0.702
AMSG_07403
Thecamonas trahens
AMSG_07403
N
0.700
KRR1
Myotis lucifugus
ENSMLUG00000002339
N
0.700
XP_002154857.1
Hydra magnipapillata
XP_002154857.1
N
0.700
CMR456C
Cyanidioschyzon merolae
CMR456C
N
0.700