XP_002489989.1 (Pichia pastoris)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 XP_002489989.1 T22071_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002489989.1 KH 135 186

Links

Other KH family RBPs
Other Pichia pastoris RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KLTH0F00506g Kluyveromyces thermotolerans KLTH0F00506g N 0.925
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.904
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.904
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.904
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.904
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.904
KRR1 Saccharomyces cerevisiae YCL059C N 0.904
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.904
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.904
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.904
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.885
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.885
A7TFC5_VANPO Vanderwaltozyma polyspora A7TFC5_VANPO N 0.885
KRR1 Candida albicans orf19.661 N 0.885
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.885
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.885
CTRG_04103 Candida tropicalis CTRG_04103 N 0.885
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.885
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.846
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.830
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.827
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.827
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.827
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.827
estExt_Genewise1Plus.C_120457 Neurospora discreta estExt_Genewise1Plus.C_120457 N 0.808
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.808
estExt_Genewise1.C_250056 Neurospora tetrasperma estExt_Genewise1.C_250056 N 0.808
FGSG_06203 Fusarium graminearum FGSG_06203 N 0.808
PMAA_048600 Penicillium marneffei PMAA_048600 N 0.808
Pa_1_24010 Podospora anserina Pa_1_24010 N 0.808
GLRG_02756 Colletotrichum graminicola GLRG_02756 N 0.808
NCU07041 Neurospora crassa NCU07041 N 0.808
e_gw1.35.542.1 Selaginella moellendorfii e_gw1.35.542.1 N 0.792
estExt_fgenesh2_pm.C_40064 Thielavia terrestris estExt_fgenesh2_pm.C_40064 N 0.788
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.788
e_gw1.11.691.1 Mycosphaerella fijiensis e_gw1.11.691.1 N 0.788
estExt_fgenesh1_pg.C_chr_50346 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_50346 N 0.788
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.788
gw1.3.2120.1 Cryphonectria parasitica gw1.3.2120.1 N 0.788
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.788
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.788
XM_846783.1 Canis familiaris ENSCAFG00000005665 N 0.788
Ame_R008803 Ailuropoda melanoleuca Ame_R008803 N 0.788
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.788
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.788
KRR1 Erinaceus europaeus ENSEEUG00000001466 N 0.788
estExt_Genewise1.C_80450 Myceliophthora thermophila estExt_Genewise1.C_80450 N 0.788
PHATRDRAFT_45441 Phaeodactylum tricornutum Phatr45441 N 0.774
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.769
LOC100407700 Callithrix jacchus ENSCJAG00000001181 N 0.769
KRR1 Macaca mulatta ENSMMUG00000009640 N 0.769
KRR1 Monodelphis domestica ENSMODG00000020451 N 0.769
KRR1_BOVIN Bos taurus ENSBTAG00000011591 N 0.769
EDP43963.1 Malassezia globosa EDP43963.1 N 0.769
KRR1 Oryctolagus cuniculus ENSOCUG00000003925 N 0.769
KRR1 Choloepus hoffmanni ENSCHOG00000009636 N 0.769
KRR1 Macropus eugenii ENSMEUG00000011365 N 0.769
ENSPPYG00000004785 Pongo pygmaeus ENSPPYG00000004785 N 0.769
LOC100050169 Equus caballus ENSECAG00000017498 N 0.769
Krr1 Dipodomys ordii ENSDORG00000004614 N 0.769
KRR1 Dasypus novemcinctus ENSDNOG00000015614 N 0.769
KRR1 Felis catus ENSFCAG00000005207 N 0.769
KRR1 Homo sapiens ENSG00000111615 N 0.769
KRR1 Gorilla gorilla ENSGGOG00000013596 N 0.769
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.769
KRR1 Cavia porcellus ENSCPOG00000014353 N 0.769
MDP0000130613 Malus x domestica MDP0000130613 N 0.769
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.769
KRR1 Tarsius syrichta ENSTSYG00000009394 N 0.769
KRR1 Tursiops truncatus ENSTTRG00000001661 N 0.769
KRR1 Pteropus vampyrus ENSPVAG00000000529 N 0.769
KRR1 Ochotona princeps ENSOPRG00000011858 N 0.769
XR_025480.1 Pan troglodytes ENSPTRG00000005238 N 0.769
KRR1 Tupaia belangeri ENSTBEG00000008145 N 0.769
KRR1 Sorex araneus ENSSARG00000009967 N 0.769
KRR1 Sus scrofa ENSSSCG00000000520 N 0.769
KRR1 Spermophilus tridecemlineatus ENSSTOG00000003620 N 0.769
YALI0F30393g Yarrowia lipolytica YALI0F30393g N 0.769
BDBG_00628 Blastomyces dermatitidis BDBG_00628 N 0.769
MDP0000221204 Malus x domestica MDP0000221204 N 0.769
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.769
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.769
KRR1 Otolemur garnettii ENSOGAG00000010313 N 0.769
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.755
estExt_Genewise1Plus.C_250151 Melampsora laricis populina estExt_Genewise1Plus.C_250151 N 0.750
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.750
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.750
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.750
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.750
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.750
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.750
krr1 Xenopus tropicalis ENSXETG00000013312 N 0.750
Krr1 Mus musculus ENSMUSG00000063334 N 0.750
CMU_000450 Cryptosporidium muris CMU_000450 N 0.750
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.750
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.750
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.750
KRR1 Danio rerio ENSDARG00000011246 N 0.750
KRR1 Meleagris gallopavo ENSMGAG00000010844 N 0.736
Q5ZKE0_CHICK Gallus gallus ENSGALG00000010227 N 0.736
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.731
UM03241 Ustilago maydis UM03241 N 0.731
GSPATP00022892001 Paramecium tetraurelia GSPATP00022892001 N 0.731
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.731
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.731
PK22510.1 Cannabis sativa PK22510.1 N 0.731
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.731
TGGT1_008040 Toxoplasma gondii TGGT1_008040 N 0.731
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.731
NCLIV_025560 Neospora caninum NCLIV_025560 N 0.731
THAPSDRAFT_268598 Thalassiosira pseudonana Thaps268598 N 0.731
KRR1 Vicugna pacos ENSVPAG00000011750 N 0.731
TGVEG_072780 Toxoplasma gondii TGVEG_072780 N 0.731
TGME49_062070 Toxoplasma gondii TGME49_062070 N 0.731
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.731
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.731
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.731
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.731
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.731
FVEG_06170 Fusarium verticillioides FVEG_06170 N 0.714
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.712
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.712
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.712
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.712
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.712
SJAG_00657 Schizosaccharomyces japonicus SJAG_00657 N 0.702