CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMGAG00000003191
(
Meleagris gallopavo
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMGAG00000003191
T18974_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000002855
KH
3
60
LLFPSQEVGSIIGKKGKSVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMI
ENSMGAP00000002855
KH
84
147
TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI
ENSMGAP00000002857
KH
3
17
LLFPSQEVGSIIGKV
ENSMGAP00000002857
KH
26
60
PQSGARINISEGNCPERIITLAGPTNAIFKAFAMI
ENSMGAP00000002857
KH
84
147
TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI
Links
Other
KH
family RBPs
Other
Meleagris gallopavo
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC426023
Gallus gallus
ENSGALG00000013313
N
0.936
PCBP2
Erinaceus europaeus
ENSEEUG00000001077
N
0.936
PCBP2
Vicugna pacos
ENSVPAG00000000406
N
0.936
ENSPPYG00000011525
Pongo pygmaeus
ENSPPYG00000011525
N
0.844
Pcbp3
Rattus norvegicus
ENSRNOG00000001245
I
0.840
PCBP3
Canis familiaris
ENSCAFG00000011907
N
0.840
AAH74333
Xenopus laevis
AAH74333
N
0.840
Pcbp3
Dipodomys ordii
ENSDORG00000003640
N
0.840
PCBP3
Ornithorhynchus anatinus
ENSOANG00000006265
N
0.840
Pcbp3
Mus musculus
ENSMUSG00000001120
D
0.840
AAI33216
Xenopus laevis
AAI33216
N
0.832
pcbp3
Danio rerio
ENSDARG00000054378
I
0.832
PCBP3
Takifugu rubripes
ENSTRUG00000013604
I
0.824
pcbp1
Xenopus tropicalis
ENSXETG00000011483
N
0.795
PCBP3
Tarsius syrichta
ENSTSYG00000005254
N
0.779
PCBP3
Spermophilus tridecemlineatus
ENSSTOG00000007178
N
0.770
ENSTNIG00000003546
Tetraodon nigroviridis
ENSTNIG00000003546
N
0.762
ENSTRUG00000017789
Takifugu rubripes
ENSTRUG00000017789
I
0.760
zgc:110045
Danio rerio
ENSDARG00000057141
N
0.752
PCBP4
Danio rerio
ENSDARG00000024276
N
0.728
PCBP4
Takifugu rubripes
ENSTRUG00000007426
I
0.720