ENSTNIG00000003546 (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000003546 T19596_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000006135 KH 13 70
ENSTNIP00000006135 KH 94 157

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.928
zgc:110045 Danio rerio ENSDARG00000057141 N 0.856
ENSPPYG00000011525 Pongo pygmaeus ENSPPYG00000011525 N 0.828
AAH74333 Xenopus laevis AAH74333 N 0.824
Pcbp3 Dipodomys ordii ENSDORG00000003640 N 0.824
PCBP3 Ornithorhynchus anatinus ENSOANG00000006265 N 0.824
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.824
PCBP3 Canis familiaris ENSCAFG00000011907 N 0.824
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.824
pcbp3 Danio rerio ENSDARG00000054378 I 0.816
AAI33216 Xenopus laevis AAI33216 N 0.816
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.808
PCBP4 Danio rerio ENSDARG00000024276 N 0.784
pcbp1 Xenopus tropicalis ENSXETG00000011483 N 0.779
PCBP3 Tarsius syrichta ENSTSYG00000005254 N 0.762
ENSMGAG00000003191 Meleagris gallopavo ENSMGAG00000003191 N 0.762
PCBP2 Vicugna pacos ENSVPAG00000000406 N 0.752
LOC426023 Gallus gallus ENSGALG00000013313 N 0.752
PCBP2 Erinaceus europaeus ENSEEUG00000001077 N 0.752
PCBP3 Spermophilus tridecemlineatus ENSSTOG00000007178 N 0.746
PCBP4 Homo sapiens ENSG00000090097 I 0.736
PHUM522820 Pediculus humanus PHUM522820 N 0.728
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.728