PCBP1 (Microcebus murinus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMICG00000002140 T19001_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.767
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.767
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.709
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMICP00000001958 KH 15 68
ENSMICP00000001958 KH 125 162
ENSMICP00000001958 KH 280 342

Links

Other KH family RBPs
Other Microcebus murinus RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.822
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.773
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.767
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.767
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.767
LOC100050579 Equus caballus ENSECAG00000002544 I 0.767
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.767
PCBP1 Homo sapiens ENSG00000169564 D 0.767
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.767
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.767
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.767
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.767
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.767
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.767
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.760
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.751
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.741
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.730
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.726
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.709
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.709
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.709
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.709
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.709
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.709
PCBP2 Homo sapiens ENSG00000197111 D 0.709
PCBP2 Equus caballus ENSECAG00000022389 I 0.709
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.709
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.709
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.709
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.709
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.709
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.709
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.709
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.709
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.709
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.709
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.709
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.709
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.709
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.709
CAD29864 Xenopus laevis CAD29864 I 0.704
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.704
AAH84195 Xenopus laevis AAH84195 I 0.704
AAH41241 Xenopus laevis AAH41241 I 0.704
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.704
CAB50743 Xenopus laevis CAB50743 I 0.704