PCBP1 (Taeniopygia guttata)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTGUG00000016232 T19589_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.804
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.767
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.757
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.757
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000016553 KH 18 78
ENSTGUP00000016553 KH 123 164
ENSTGUP00000016553 KH 244 302

Links

Other KH family RBPs
Other Taeniopygia guttata RBPs

86 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.916
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.867
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.814
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.814
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.814
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.814
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.814
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.814
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.814
PCBP2 Equus caballus ENSECAG00000022389 I 0.814
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.814
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.814
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.814
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.814
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.814
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.814
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.814
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.814
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.814
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.814
PCBP2 Homo sapiens ENSG00000197111 D 0.814
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.814
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.814
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.814
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.803
AAH84195 Xenopus laevis AAH84195 I 0.798
AAH41241 Xenopus laevis AAH41241 I 0.798
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.798
CAB50743 Xenopus laevis CAB50743 I 0.798
CAD29864 Xenopus laevis CAD29864 I 0.798
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.782
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.778
pcbp2 Danio rerio ENSDARG00000013184 D 0.777
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.777
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.771
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.771
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.771
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.766
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.766
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.766
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.766
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.766
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.766
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.766
LOC100050579 Equus caballus ENSECAG00000002544 I 0.766
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.766
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.766
PCBP1 Homo sapiens ENSG00000169564 D 0.766
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.766
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.766
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.761
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.760
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.755
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.750
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.747
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.747
Pcbp2 Dipodomys ordii ENSDORG00000001384 I 0.747
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.745
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.745
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.734
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.729
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.718
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.716
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.714
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.707
LOC100050101 Equus caballus ENSECAG00000012413 I 0.707
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.707
PCBP3 Homo sapiens ENSG00000183570 I 0.707
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.707
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.707
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.707
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.707
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.707
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.707
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.707
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.707
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.707
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.707
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.707
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.707
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.707
PCBP3 Gallus gallus ENSGALG00000013155 I 0.707
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.702
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.702
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.702
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.702