PCBP1 (Otolemur garnettii)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOGAG00000008557 T19226_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.852
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.852
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.788
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.772
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.725
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000007666 KH 15 74
ENSOGAP00000007666 KH 96 156
ENSOGAP00000007666 KH 275 335

Links

Other KH family RBPs
Other Otolemur garnettii RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100050579 Equus caballus ENSECAG00000002544 I 0.820
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.820
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.820
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.820
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.820
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.820
PCBP1 Homo sapiens ENSG00000169564 D 0.820
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.820
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.820
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.820
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.820
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.820
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.804
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.794
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.783
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.762
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.762
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.762
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.762
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.762
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.762
PCBP2 Equus caballus ENSECAG00000022389 I 0.762
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.762
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.762
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.762
PCBP2 Homo sapiens ENSG00000197111 D 0.762
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.762
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.762
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.762
CAB50743 Xenopus laevis CAB50743 I 0.762
CAD29864 Xenopus laevis CAD29864 I 0.762
AAH84195 Xenopus laevis AAH84195 I 0.762
AAH41241 Xenopus laevis AAH41241 I 0.762
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.762
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.762
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.762
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.762
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.762
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.762
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.762
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.762
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.757
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.751
pcbp2 Danio rerio ENSDARG00000013184 D 0.746
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.741
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.735
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.735
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.735
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.726
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.725
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.722
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.720
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.720
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.714
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.709