PCBP1 (Canis familiaris)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCAFG00000013845 T18475_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Pcbp1
M207_0.6 		Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239 		0.963
PCBP1
M177_0.6 		Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186 		0.963
PCBP2
M043_0.6 		Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044 		0.910
pcbp2
M211_0.6 		Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246 		0.888
Pcbp3
M188_0.6 		Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215 		0.835
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000020397 KH 15 75
ENSCAFP00000020397 KH 99 162
ENSCAFP00000020397 KH 287 349

Links

Other KH family RBPs
Other Canis familiaris RBPs

110 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.963
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.963
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.963
PCBP1 Homo sapiens ENSG00000169564 D 0.963
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.963
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.963
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.963
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.963
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.963
LOC100050579 Equus caballus ENSECAG00000002544 I 0.963
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.963
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.963
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.941
PCBP1 Callithrix jacchus ENSCJAG00000004017 I 0.931
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.910
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.910
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.910
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.910
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.910
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.910
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.910
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.910
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.910
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.910
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.910
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.910
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.910
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.910
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.910
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.910
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.910
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.910
PCBP2 Homo sapiens ENSG00000197111 D 0.910
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.910
PCBP2 Equus caballus ENSECAG00000022389 I 0.910
AAH84195 Xenopus laevis AAH84195 I 0.904
AAH41241 Xenopus laevis AAH41241 I 0.904
CAB50743 Xenopus laevis CAB50743 I 0.904
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.904
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.904
CAD29864 Xenopus laevis CAD29864 I 0.904
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.899
pcbp2 Danio rerio ENSDARG00000013184 D 0.888
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.883
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.878
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.872
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.872
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.872
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.867
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.862
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.856
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.846
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.835
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.835
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.835
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.835
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.835
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.835
LOC100050101 Equus caballus ENSECAG00000012413 I 0.835
PCBP3 Homo sapiens ENSG00000183570 I 0.835
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.835
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.835
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.835
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.835
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.835
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.835
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.835
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.830
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.830
PCBP3 Gallus gallus ENSGALG00000013155 I 0.830
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.824
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.824
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.824
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.824
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.824
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.824
PCBP3 Gallus gallus ENSGALG00000004394 I 0.814
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.814
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.809
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.799
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.798
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.794
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.794
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.788
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.787
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.785
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.771
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.761
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.761
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.750
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.745
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.745
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.745
pcbp3 Danio rerio ENSDARG00000054378 I 0.745
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.741
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.734
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.729
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.721
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.720
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.714
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.714
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.714
PCBP3 Felis catus ENSFCAG00000014812 I 0.713
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.713
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.711
fgenesh2_pg.scaffold_166000022 Branchiostoma floridae fgenesh2_pg.scaffold_166000022 I 0.709
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.709
estExt_gwp.C_3950051 Branchiostoma floridae estExt_gwp.C_3950051 I 0.709
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.705
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.700