PCBP1 (Callithrix jacchus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSCJAG00000004017 T18529_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PCBP1
M177_0.6
Homo sapiens CCWWHCC RNAcompete
Ray et al.(2013)
RNCMPT00186
0.957
Pcbp1
M207_0.6
Mus musculus CYUUCC RNAcompete
Ray et al.(2013)
RNCMPT00239
0.957
PCBP2
M043_0.6
Homo sapiens CCYYCCH RNAcompete
Ray et al.(2013)
RNCMPT00044
0.899
pcbp2
M211_0.6
Danio rerio WWUCCC RNAcompete
Ray et al.(2013)
RNCMPT00246
0.872
Pcbp3
M188_0.6
Mus musculus UUUYCC RNAcompete
Ray et al.(2013)
RNCMPT00215
0.835
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000007302 KH 16 76
ENSCJAP00000007302 KH 99 162
ENSCJAP00000007302 KH 244 306

Links

Other KH family RBPs
Other Callithrix jacchus RBPs

108 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity
Action
ENSPPYG00000012328 Pongo pygmaeus ENSPPYG00000012328 I 0.957
PCBP1 Homo sapiens ENSG00000169564 D 0.957
Pcbp1 Rattus norvegicus ENSRNOG00000017708 I 0.957
PCBP1_RABIT Oryctolagus cuniculus ENSOCUG00000003634 I 0.957
Pcbp1 Mus musculus ENSMUSG00000051695 D 0.957
PCBP1 Gorilla gorilla ENSGGOG00000028130 I 0.957
PCBP1 Myotis lucifugus ENSMLUG00000014173 I 0.957
LOC100050579 Equus caballus ENSECAG00000002544 I 0.957
PCBP1 Pan troglodytes ENSPTRG00000012025 I 0.957
PCBP1_BOVIN Bos taurus ENSBTAG00000008985 I 0.957
PCBP1 Cavia porcellus ENSCPOG00000013511 I 0.957
Ame_R002707 Ailuropoda melanoleuca Ame_R002707 I 0.957
A6MKZ3_CALJA Callithrix jacchus ENSCJAG00000022539 I 0.957
PCBP1 Canis familiaris ENSCAFG00000013845 I 0.931
Pcbp2 Mus musculus ENSMUSG00000056851 I 0.899
PCBP2 Canis familiaris ENSCAFG00000006821 I 0.899
PCBP2 Macaca mulatta ENSMMUG00000006608 I 0.899
PCBP2 Microcebus murinus ENSMICG00000011651 I 0.899
Q3SYT9_BOVIN Bos taurus ENSBTAG00000020757 I 0.899
ENSMODG00000000280 Monodelphis domestica ENSMODG00000000280 I 0.899
ENSPPYG00000004581 Pongo pygmaeus ENSPPYG00000004581 I 0.899
PCBP2 Pteropus vampyrus ENSPVAG00000012284 I 0.899
ENSACAG00000000783 Anolis carolinensis ENSACAG00000000783 I 0.899
PCBP2 Sus scrofa ENSSSCG00000000274 I 0.899
ENSLAFG00000013187 Loxodonta africana ENSLAFG00000013187 I 0.899
PCBP2 Pan troglodytes ENSPTRG00000005018 I 0.899
PCBP2 Procavia capensis ENSPCAG00000005154 I 0.899
PCBP2 Tursiops truncatus ENSTTRG00000017174 I 0.899
PCBP2 Ochotona princeps ENSOPRG00000004680 I 0.899
ENSOCUG00000022490 Oryctolagus cuniculus ENSOCUG00000022490 I 0.899
PCBP2 Homo sapiens ENSG00000197111 D 0.899
PCBP2 Dasypus novemcinctus ENSDNOG00000008688 I 0.899
PCBP2 Gorilla gorilla ENSGGOG00000012613 I 0.899
ENSCPOG00000000967 Cavia porcellus ENSCPOG00000000967 I 0.899
PCBP2 Equus caballus ENSECAG00000022389 I 0.899
ENSCJAG00000034075 Callithrix jacchus ENSCJAG00000034075 I 0.894
AAH84195 Xenopus laevis AAH84195 I 0.888
CAB50743 Xenopus laevis CAB50743 I 0.888
CAD29864 Xenopus laevis CAD29864 I 0.888
AAH41241 Xenopus laevis AAH41241 I 0.888
pcbp3 Xenopus tropicalis ENSXETG00000012658 I 0.888
LOC100392590 Callithrix jacchus ENSCJAG00000018590 I 0.888
pcbp2 Danio rerio ENSDARG00000013184 D 0.872
ENSORLG00000005176 Oryzias latipes ENSORLG00000005176 I 0.862
ENSTRUG00000009361 Takifugu rubripes ENSTRUG00000009361 I 0.862
PCBP1 Tetraodon nigroviridis ENSTNIG00000012585 I 0.856
ENSORLG00000012872 Oryzias latipes ENSORLG00000012872 I 0.856
ENSGACG00000006681 Gasterosteus aculeatus ENSGACG00000006681 I 0.851
ENSGACG00000003197 Gasterosteus aculeatus ENSGACG00000003197 I 0.851
PCBP2 Tarsius syrichta ENSTSYG00000009771 I 0.851
LOC100409398 Callithrix jacchus ENSCJAG00000007694 I 0.846
ENSTRUG00000011419 Takifugu rubripes ENSTRUG00000011419 I 0.840
PCBP3 Oryctolagus cuniculus ENSOCUG00000002696 I 0.835
PCBP3 Cavia porcellus ENSCPOG00000003648 I 0.835
PCBP3 Homo sapiens ENSG00000183570 I 0.835
PCBP3 Tursiops truncatus ENSTTRG00000015075 I 0.835
Pcbp3 Rattus norvegicus ENSRNOG00000001245 I 0.835
PCBP3 Meleagris gallopavo ENSMGAG00000001883 I 0.835
PCBP3 Pan troglodytes ENSPTRG00000014010 I 0.835
PCBP3 Gorilla gorilla ENSGGOG00000003683 I 0.835
PCBP3 Macaca mulatta ENSMMUG00000003825 I 0.835
Pcbp3 Mus musculus ENSMUSG00000001120 D 0.835
LOC100408015 Callithrix jacchus ENSCJAG00000001903 I 0.835
LOC100050101 Equus caballus ENSECAG00000012413 I 0.835
PCBP3 Anolis carolinensis ENSACAG00000004607 I 0.835
ENSMODG00000017748 Monodelphis domestica ENSMODG00000017748 I 0.830
PCBP3-2 Taeniopygia guttata ENSTGUG00000008158 I 0.824
PCBP3 Takifugu rubripes ENSTRUG00000006280 I 0.824
PCBP2 Macropus eugenii ENSMEUG00000001887 I 0.824
PCBP3 Takifugu rubripes ENSTRUG00000013604 I 0.824
Q17QV0_BOVIN Bos taurus ENSBTAG00000030775 I 0.824
PCBP3 Tetraodon nigroviridis ENSTNIG00000010615 I 0.824
PCBP3 Gasterosteus aculeatus ENSGACG00000014955 I 0.824
PCBP3 Gallus gallus ENSGALG00000013155 I 0.824
PCBP3 Gasterosteus aculeatus ENSGACG00000002266 I 0.824
ENSACAG00000009819 Anolis carolinensis ENSACAG00000009819 I 0.819
PCBP3 Gallus gallus ENSGALG00000004394 I 0.809
PCBP3 Macropus eugenii ENSMEUG00000012960 I 0.803
PCBP2 Echinops telfairi ENSETEG00000014741 I 0.799
Ame_R011627 Ailuropoda melanoleuca Ame_R011627 I 0.798
D4ADH2_RAT Rattus norvegicus ENSRNOG00000039295 I 0.788
PCBP3 Oryzias latipes ENSORLG00000000059 I 0.788
PCBP3 Ochotona princeps ENSOPRG00000003431 I 0.785
PCBP1 Otolemur garnettii ENSOGAG00000008557 I 0.783
ENSRNOG00000019487 Rattus norvegicus ENSRNOG00000019487 I 0.783
ENSMGAG00000006794 Meleagris gallopavo ENSMGAG00000006794 I 0.777
PCBP2 Myotis lucifugus ENSMLUG00000009971 I 0.766
ENSORLG00000014385 Oryzias latipes ENSORLG00000014385 I 0.755
PCBP3 Loxodonta africana ENSLAFG00000020835 I 0.755
Ame_R007160 Ailuropoda melanoleuca Ame_R007160 I 0.745
pcbp3 Danio rerio ENSDARG00000054378 I 0.739
PCBP3 Otolemur garnettii ENSOGAG00000008044 I 0.739
PCBP3 Microcebus murinus ENSMICG00000012679 I 0.739
PCBP1 Taeniopygia guttata ENSTGUG00000016232 I 0.734
PCBP4 Takifugu rubripes ENSTRUG00000007426 I 0.730
PCBP1 Microcebus murinus ENSMICG00000002140 I 0.730
PCBP4 Gasterosteus aculeatus ENSGACG00000002664 I 0.725
PCBP4 Tetraodon nigroviridis ENSTNIG00000017887 I 0.725
D4A8D6_RAT Rattus norvegicus ENSRNOG00000006713 I 0.724
PCBP2 Tupaia belangeri ENSTBEG00000015592 I 0.723
ENSLAFG00000025534 Loxodonta africana ENSLAFG00000025534 I 0.720
ENSGACG00000003044 Gasterosteus aculeatus ENSGACG00000003044 I 0.716
ENSMODG00000020653 Monodelphis domestica ENSMODG00000020653 I 0.714
PCBP3 Myotis lucifugus ENSMLUG00000003074 I 0.713
PCBP3 Felis catus ENSFCAG00000014812 I 0.713
ENSTRUG00000017789 Takifugu rubripes ENSTRUG00000017789 I 0.705
PCBP4 Ornithorhynchus anatinus ENSOANG00000014110 I 0.705
PCBP4 Anolis carolinensis ENSACAG00000011701 I 0.700