Khdrbs3 (Rattus norvegicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSRNOG00000009539 T19430_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.855
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000012753 KH 1 71

Links

Other KH family RBPs
Other Rattus norvegicus RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
KHDRBS3 Sorex araneus ENSSARG00000011751 I 1.000
KHDRBS3 Tarsius syrichta ENSTSYG00000004106 I 0.904
Ame_R015982 Ailuropoda melanoleuca Ame_R015982 I 0.887
KHDRBS2 Myotis lucifugus ENSMLUG00000005484 I 0.887
KHDRBS2 Procavia capensis ENSPCAG00000001426 I 0.863
KHDRBS3 Canis familiaris ENSCAFG00000001166 I 0.855
KHDRBS3 Anolis carolinensis ENSACAG00000012042 I 0.855
KHDRBS3 Ornithorhynchus anatinus ENSOANG00000014074 I 0.855
A4FV24_BOVIN Bos taurus ENSBTAG00000002181 I 0.855
Khdrbs3 Mus musculus ENSMUSG00000022332 I 0.855
Q6J4Q6_MACMU Macaca mulatta ENSMMUG00000022248 I 0.855
Q6J4Q8_9PRIM Gorilla gorilla ENSGGOG00000000940 I 0.855
KHDRBS3 Homo sapiens ENSG00000131773 D 0.855
KHDRBS3 Loxodonta africana ENSLAFG00000004849 I 0.855
KHDRBS3 Cavia porcellus ENSCPOG00000000342 I 0.855
KHDRBS3 Echinops telfairi ENSETEG00000004701 I 0.855
LOC100399263 Callithrix jacchus ENSCJAG00000004331 I 0.855
KHDRBS3 Monodelphis domestica ENSMODG00000000975 I 0.855
Ame_R010681 Ailuropoda melanoleuca Ame_R010681 I 0.855
KHDRBS3 Tupaia belangeri ENSTBEG00000004773 I 0.855
KHDRBS3 Sus scrofa ENSSSCG00000005941 I 0.855
KHDRBS3 Tursiops truncatus ENSTTRG00000001270 I 0.855
Q6J4Q9_PANTR Pan troglodytes ENSPTRG00000020608 I 0.855
KHDRBS3 Otolemur garnettii ENSOGAG00000005150 I 0.855
KHDRBS3 Spermophilus tridecemlineatus ENSSTOG00000008710 I 0.843
KHDRBS3 Gallus gallus ENSGALG00000016203 I 0.843
LOC100058116 Equus caballus ENSECAG00000010194 I 0.843
KHDRBS3 Ochotona princeps ENSOPRG00000000404 I 0.843
KHDRBS3 Meleagris gallopavo ENSMGAG00000012888 I 0.843
KHDRBS3 Taeniopygia guttata ENSTGUG00000012611 I 0.843
KHDRBS3 Oryctolagus cuniculus ENSOCUG00000000743 I 0.843
khdrbs3 Xenopus tropicalis ENSXETG00000009227 I 0.841
KHDRBS3 Pteropus vampyrus ENSPVAG00000017021 I 0.833
KHDRBS3 Takifugu rubripes ENSTRUG00000013451 I 0.795
KHDRBS3 Gasterosteus aculeatus ENSGACG00000008847 I 0.795
KHDRBS3 Tetraodon nigroviridis ENSTNIG00000014021 I 0.795
KHDRBS3 Oryzias latipes ENSORLG00000013441 I 0.795
Khdrbs1 Dipodomys ordii ENSDORG00000011530 I 0.764
KHDRBS1 Dasypus novemcinctus ENSDNOG00000003761 I 0.764
KHDRBS1 Microcebus murinus ENSMICG00000001428 I 0.753
KHDRBS2 Bos taurus ENSBTAG00000043990 I 0.750
KHDRBS2 Anolis carolinensis ENSACAG00000006691 I 0.750
KHDRBS2 Canis familiaris ENSCAFG00000002470 I 0.750
KHDRBS2 Erinaceus europaeus ENSEEUG00000003986 I 0.750
LOC100395662 Callithrix jacchus ENSCJAG00000001766 I 0.750
KHDRBS2 Vicugna pacos ENSVPAG00000001469 I 0.750
KHDRBS2 Taeniopygia guttata ENSTGUG00000012786 I 0.750
KHDRBS2 Sus scrofa ENSSSCG00000001490 I 0.750
KHDRBS2 Pan troglodytes ENSPTRG00000018311 I 0.750
KHDRBS2 Tarsius syrichta ENSTSYG00000007203 I 0.750
KHDRBS2 Tursiops truncatus ENSTTRG00000005591 I 0.750
KHDRBS2 Oryctolagus cuniculus ENSOCUG00000012344 I 0.750
KHDRBS2 Macaca mulatta ENSMMUG00000003329 I 0.750
KHDRBS2 Homo sapiens ENSG00000112232 D 0.750
Khdrbs2 Rattus norvegicus ENSRNOG00000012284 I 0.750
KHDRBS2 Gorilla gorilla ENSGGOG00000025068 I 0.750
LOC100056966 Equus caballus ENSECAG00000021541 I 0.750
KHDRBS2 Loxodonta africana ENSLAFG00000006655 I 0.750
KHDRBS2 Meleagris gallopavo ENSMGAG00000013877 I 0.750
KHDRBS2 Cavia porcellus ENSCPOG00000025621 I 0.750
KHDRBS2 Gallus gallus ENSGALG00000016276 I 0.750
gw1.4.210.1 Daphnia pulex gw1.4.210.1 N 0.747
KHDRBS2 Monodelphis domestica ENSMODG00000018714 I 0.738
Khdrbs2 Mus musculus ENSMUSG00000026058 I 0.738
Khdrbs2 Dipodomys ordii ENSDORG00000005701 I 0.738
KHDRBS2 Dasypus novemcinctus ENSDNOG00000014028 I 0.738
khdrbs2 Danio rerio ENSDARG00000069469 I 0.726
KHDRBS2 Gasterosteus aculeatus ENSGACG00000006097 I 0.726
KHDRBS2 Takifugu rubripes ENSTRUG00000015760 I 0.726
ENSCJAG00000003689 Callithrix jacchus ENSCJAG00000003689 I 0.726
KHDRBS2 Oryzias latipes ENSORLG00000010165 I 0.702