CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PHUM522820
(
Pediculus humanus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
PHUM522820
T20183_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM522820-PA
KH
16
76
TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNAIFKAFSLI
PHUM522820-PA
KH
101
164
TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHI
Links
Other
KH
family RBPs
Other
Pediculus humanus
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Pcbp3
Rattus norvegicus
ENSRNOG00000001245
I
0.808
pcbp3
Danio rerio
ENSDARG00000054378
I
0.808
Pcbp3
Dipodomys ordii
ENSDORG00000003640
N
0.808
Pcbp3
Mus musculus
ENSMUSG00000001120
D
0.808
PCBP3
Ornithorhynchus anatinus
ENSOANG00000006265
N
0.808
PCBP3
Canis familiaris
ENSCAFG00000011907
N
0.808
AAH74333
Xenopus laevis
AAH74333
N
0.808
PCBP3
Takifugu rubripes
ENSTRUG00000013604
I
0.800
AAI33216
Xenopus laevis
AAI33216
N
0.800
zgc:110045
Danio rerio
ENSDARG00000057141
N
0.784
ENSTRUG00000017789
Takifugu rubripes
ENSTRUG00000017789
I
0.776
CBN14493
Caenorhabditis brenneri
CBN14493
N
0.760
CBG15694
Caenorhabditis briggsae
CBG15694
N
0.760
CRE26806
Caenorhabditis remanei
CRE26806
N
0.760
PCBP2
Vicugna pacos
ENSVPAG00000000406
N
0.752
PCBP2
Erinaceus europaeus
ENSEEUG00000001077
N
0.752
pes-4
Caenorhabditis elegans
Y119D3B.17
N
0.752
ENSPPYG00000011525
Pongo pygmaeus
ENSPPYG00000011525
N
0.752
LOC426023
Gallus gallus
ENSGALG00000013313
N
0.752
PCBP4
Danio rerio
ENSDARG00000024276
N
0.736
ENSTNIG00000003546
Tetraodon nigroviridis
ENSTNIG00000003546
N
0.728
PCBP4
Takifugu rubripes
ENSTRUG00000007426
I
0.712
pcbp1
Xenopus tropicalis
ENSXETG00000011483
N
0.704