Ppa-mex-3 (Pristionchus pacificus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PPA08528 T20244_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PPA08528 KH 16 58
PPA08528 KH 89 148

Links

Other KH family RBPs
Other Pristionchus pacificus RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.806
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.777
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.767
LOC100063974 Equus caballus ENSECAG00000007279 N 0.767
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.767
MEX3C Sorex araneus ENSSARG00000006940 I 0.767
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.767
MEX3C Microcebus murinus ENSMICG00000005815 I 0.767
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.767
MEX3A Loxodonta africana ENSLAFG00000009220 N 0.767
MEX3A Meleagris gallopavo ENSMGAG00000015563 N 0.767
MEX3A Gallus gallus ENSGALG00000014016 N 0.767
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.767
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.767
mex3a Xenopus tropicalis ENSXETG00000012704 N 0.767
MEX3A Anolis carolinensis ENSACAG00000003739 N 0.767
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.760
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.760
MEX3A Taeniopygia guttata ENSTGUG00000003692 N 0.760
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.760
MEX3A Myotis lucifugus ENSMLUG00000010185 N 0.757
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.757
MEX3A Pan troglodytes ENSPTRG00000030373 N 0.757
MEX3C Echinops telfairi ENSETEG00000003647 I 0.757
MEX3A Sorex araneus ENSSARG00000009868 N 0.757
CJA18034 Caenorhabditis japonica CJA18034 I 0.752
CBN20397 Caenorhabditis brenneri CBN20397 I 0.752
CBN24563 Caenorhabditis brenneri CBN24563 I 0.752
PHUM418100 Pediculus humanus PHUM418100 I 0.750
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.750
MEX3D Gallus gallus ENSGALG00000001106 I 0.750
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.748
MEX3B Sorex araneus ENSSARG00000006007 I 0.748
MEX3B Procavia capensis ENSPCAG00000014150 I 0.748
143653 Helobdella robusta 143653 N 0.748
CBG05100 Caenorhabditis briggsae CBG05100 I 0.744
mex-3 Caenorhabditis elegans F53G12.5 I 0.744
CRE03823 Caenorhabditis remanei CRE03823 I 0.744
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.743
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.740
MEX3B Canis familiaris ENSCAFG00000013759 I 0.740
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.740
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.740
Mex3b Mus musculus ENSMUSG00000057706 I 0.740
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.740
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.740
MEX3A Takifugu rubripes ENSTRUG00000007796 N 0.731
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.731
MEX3A Tetraodon nigroviridis ENSTNIG00000004473 N 0.731
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.728
MEX3D Procavia capensis ENSPCAG00000010972 I 0.728
MEX3D Felis catus ENSFCAG00000002615 I 0.728
MEX3D Canis familiaris ENSCAFG00000023712 I 0.721
MEX3D Bos taurus ENSBTAG00000044028 I 0.721
MEX3A Gasterosteus aculeatus ENSGACG00000013282 N 0.718
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.714
MEX3D Myotis lucifugus ENSMLUG00000017018 N 0.712
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.709
MEX3C Danio rerio ENSDARG00000068971 I 0.709