MEX3D (Takifugu rubripes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTRUG00000007986 T19642_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.861
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000019880 KH 79 120
ENSTRUP00000019880 KH 156 215
ENSTRUP00000019881 KH 41 101
ENSTRUP00000019881 KH 137 196
ENSTRUP00000019882 KH 42 102
ENSTRUP00000019882 KH 138 197
ENSTRUP00000019883 KH 8 68
ENSTRUP00000019883 KH 104 163
ENSTRUP00000019884 KH 18 58
ENSTRUP00000019884 KH 94 153

Links

Other KH family RBPs
Other Takifugu rubripes RBPs

166 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 1.000
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.992
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.975
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.975
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.975
MEX3D Gallus gallus ENSGALG00000001106 I 0.971
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.971
MEX3D Homo sapiens ENSG00000181588 I 0.959
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.959
Mex3d Mus musculus ENSMUSG00000048696 I 0.959
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.959
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.959
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.959
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.959
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.959
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.951
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.951
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.951
MEX3D Canis familiaris ENSCAFG00000023712 I 0.951
MEX3D Bos taurus ENSBTAG00000044028 I 0.951
Mex3b Mus musculus ENSMUSG00000057706 I 0.951
MEX3B Canis familiaris ENSCAFG00000013759 I 0.951
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.951
MEX3B Sorex araneus ENSSARG00000006007 I 0.950
MEX3D Felis catus ENSFCAG00000002615 I 0.950
MEX3B Procavia capensis ENSPCAG00000014150 I 0.950
MEX3C Echinops telfairi ENSETEG00000003647 I 0.950
AAI42552 Xenopus laevis AAI42552 I 0.950
AAI33220 Xenopus laevis AAI33220 I 0.942
AAI30114 Xenopus laevis AAI30114 I 0.942
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.941
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.941
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.941
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.941
MEX3C Microcebus murinus ENSMICG00000005815 I 0.941
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.941
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.941
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.941
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.941
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.941
MEX3D Procavia capensis ENSPCAG00000010972 I 0.941
MEX3C Sorex araneus ENSSARG00000006940 I 0.941
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.941
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.941
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.926
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.926
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.924
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.922
MEX3C Danio rerio ENSDARG00000068971 I 0.921
MEX3C Procavia capensis ENSPCAG00000009258 I 0.918
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.918
MEX3B Bos taurus ENSBTAG00000016630 I 0.918
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.918
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.918
MEX3B Homo sapiens ENSG00000183496 I 0.918
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.918
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.918
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.918
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.918
MEX3B Equus caballus ENSECAG00000013497 I 0.918
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.918
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.917
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.914
MEX3C Equus caballus ENSECAG00000021727 I 0.910
MEX3B Danio rerio ENSDARG00000058369 I 0.910
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.910
MEX3C Homo sapiens ENSG00000176624 I 0.910
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.910
Mex3c Mus musculus ENSMUSG00000037253 I 0.910
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.910
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.910
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.910
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.910
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.910
MEX3C Oryzias latipes ENSORLG00000004985 I 0.910
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.910
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.910
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.910
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.910
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.910
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.910
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.910
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.910
MEX3D Myotis lucifugus ENSMLUG00000017018 N 0.904
AAI30070 Xenopus laevis AAI30070 I 0.902
BAH79688 Xenopus laevis BAH79688 I 0.902
AAI28670 Xenopus laevis AAI28670 I 0.902
A1L3F4 Xenopus laevis A1L3F4 I 0.902
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.902
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.902
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.901
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.893
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.885
MEX3C Canis familiaris ENSCAFG00000000162 I 0.885
PHUM418100 Pediculus humanus PHUM418100 I 0.883
MKNK2 Callithrix jacchus ENSCJAG00000000539 I 0.877
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.877
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.869
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.869
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.869
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.869
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.869
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.863
MEX3A Myotis lucifugus ENSMLUG00000010185 N 0.861
MEX3A Pan troglodytes ENSPTRG00000030373 N 0.861
MEX3A Gasterosteus aculeatus ENSGACG00000013282 N 0.861
MEX3A Sorex araneus ENSSARG00000009868 N 0.861
GH23938 Drosophila grimshawi FBgn0131395 I 0.861
GG16398 Drosophila erecta FBgn0108630 I 0.861
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.861
CG11360 Drosophila melanogaster FBgn0039920 D 0.861
GL18139 Drosophila persimilis FBgn0155742 I 0.861
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.861
GJ18673 Drosophila virilis FBgn0205827 I 0.861
GK13594 Drosophila willistoni FBgn0215602 I 0.861
GD24410 Drosophila simulans FBgn0195748 I 0.861
GM26809 Drosophila sechellia FBgn0181661 I 0.861
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.861
GE14558 Drosophila yakuba FBgn0232157 I 0.861
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.861
AAI30196 Xenopus laevis AAI30196 I 0.861
MEX3A Anolis carolinensis ENSACAG00000003739 N 0.854
mex3a Xenopus tropicalis ENSXETG00000012704 N 0.854
MEX3A Gallus gallus ENSGALG00000014016 N 0.854
MEX3A Meleagris gallopavo ENSMGAG00000015563 N 0.854
MEX3A Loxodonta africana ENSLAFG00000009220 N 0.853
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.853
LOC100063974 Equus caballus ENSECAG00000007279 N 0.853
MEX3A Danio rerio ENSDARG00000076638 I 0.852
GF20555 Drosophila ananassae FBgn0097561 I 0.852
MEX3A Taeniopygia guttata ENSTGUG00000003692 N 0.846
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.844
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.844
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.844
MEX3A Bos taurus ENSBTAG00000019158 I 0.844
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.844
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.844
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.844
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.844
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.844
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.844
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.844
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.844
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.842
MEX3A Takifugu rubripes ENSTRUG00000007796 N 0.837
MEX3A Tetraodon nigroviridis ENSTNIG00000004473 N 0.837
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.836
CRE03823 Caenorhabditis remanei CRE03823 I 0.803
mex-3 Caenorhabditis elegans F53G12.5 I 0.795
CBN24563 Caenorhabditis brenneri CBN24563 I 0.795
CBN20397 Caenorhabditis brenneri CBN20397 I 0.795
CBG05100 Caenorhabditis briggsae CBG05100 I 0.787
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.787
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.779
CJA18034 Caenorhabditis japonica CJA18034 I 0.779
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.770
MEX3A Microcebus murinus ENSMICG00000002233 I 0.770
143355 Helobdella robusta 143355 N 0.765
143653 Helobdella robusta 143653 N 0.755
Ppa-mex-3 Pristionchus pacificus PPA08528 N 0.748
AGAP013259 Anopheles gambiae AGAP013259 I 0.730
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.730
AAEL012708 Aedes aegypti AAEL012708 I 0.730
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.730
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.721