CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MEX3A
(
Sorex araneus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSSARG00000009868
T19476_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000008922
KH
1
41
CKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREI
ENSSARP00000008922
KH
73
132
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI
Links
Other
KH
family RBPs
Other
Sorex araneus
RBPs
121 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
1.000
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
1.000
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.990
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.990
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.971
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.971
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.971
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.971
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.962
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.891
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.881
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.881
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.873
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.873
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.873
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.873
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.873
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.873
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.865
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.865
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.864
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.863
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.863
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.861
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.861
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.853
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.851
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.851
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.851
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.851
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.851
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.851
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.851
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.851
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.843
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.843
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.843
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.843
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.843
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.835
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.835
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.835
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.835
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.835
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.835
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.835
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.835
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.835
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.835
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.835
MEX3D
Felis catus
ENSFCAG00000002615
I
0.832
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.832
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.832
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.832
AAI30196
Xenopus laevis
AAI30196
I
0.826
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.826
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.824
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.824
MEX3C
Danio rerio
ENSDARG00000068971
I
0.822
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.819
PHUM418100
Pediculus humanus
PHUM418100
I
0.816
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.814
e_gw1.312.50.1
Capitella teleta
e_gw1.312.50.1
I
0.802
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.800
MEX3D
Myotis lucifugus
ENSMLUG00000017018
N
0.798
MKNK2
Callithrix jacchus
ENSCJAG00000000539
I
0.764
Ppa-mex-3
Pristionchus pacificus
PPA08528
N
0.757
143355
Helobdella robusta
143355
N
0.755
MEX3A
Danio rerio
ENSDARG00000076638
I
0.752
143653
Helobdella robusta
143653
N
0.745
MEX3B
Danio rerio
ENSDARG00000058369
I
0.744
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.744
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.736
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.736
BAH79688
Xenopus laevis
BAH79688
I
0.736
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.736
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.736
MEX3B
Homo sapiens
ENSG00000183496
I
0.736
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.736
A1L3F4
Xenopus laevis
A1L3F4
I
0.736
MEX3B
Equus caballus
ENSECAG00000013497
I
0.736
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.736
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.736
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.736
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.736
AAI30070
Xenopus laevis
AAI30070
I
0.736
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.736
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.731
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.730
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.727
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.727
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.725
AAI28670
Xenopus laevis
AAI28670
I
0.725
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.719
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.719
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.719
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.719
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.717
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.711
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.711
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.711
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.711
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.711
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.711
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.711
MEX3C
Equus caballus
ENSECAG00000021727
I
0.711
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.711
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.711
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.711
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.711
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.711
MEX3C
Homo sapiens
ENSG00000176624
I
0.711
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.711
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.711
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.711
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.711
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.711
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.711
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.711
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.702
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.702