CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3A
(
Taeniopygia guttata
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTGUG00000003692
T19570_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000003799
KH
7
50
IQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREI
ENSTGUP00000003799
KH
82
141
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI
Links
Other
KH
family RBPs
Other
Taeniopygia guttata
RBPs
126 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.990
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.990
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.981
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.981
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.971
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.971
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.962
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.962
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.962
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.875
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.875
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.872
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.865
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.865
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.865
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.857
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.857
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.857
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.857
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.857
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.857
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.857
AAI30196
Xenopus laevis
AAI30196
I
0.851
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.848
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.846
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.846
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.846
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.843
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.843
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.843
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.843
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.843
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.843
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.843
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.843
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.843
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.843
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.843
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.837
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.837
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.837
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.837
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.837
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.837
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.837
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.837
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.829
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.829
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.829
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.829
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.829
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.829
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.826
MEX3D
Felis catus
ENSFCAG00000002615
I
0.817
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.817
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.817
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.810
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.810
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.810
MEX3C
Danio rerio
ENSDARG00000068971
I
0.808
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.808
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.808
MEX3D
Myotis lucifugus
ENSMLUG00000017018
N
0.800
PHUM418100
Pediculus humanus
PHUM418100
I
0.800
e_gw1.312.50.1
Capitella teleta
e_gw1.312.50.1
I
0.779
MKNK2
Callithrix jacchus
ENSCJAG00000000539
I
0.774
MEX3A
Danio rerio
ENSDARG00000076638
I
0.769
Ppa-mex-3
Pristionchus pacificus
PPA08528
N
0.760
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.754
MEX3B
Danio rerio
ENSDARG00000058369
I
0.754
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.752
143355
Helobdella robusta
143355
N
0.750
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.746
MEX3B
Homo sapiens
ENSG00000183496
I
0.746
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.746
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.746
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.746
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.746
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.746
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.746
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.746
MEX3B
Equus caballus
ENSECAG00000013497
I
0.746
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.746
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.746
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.742
143653
Helobdella robusta
143653
N
0.740
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.738
AAI30070
Xenopus laevis
AAI30070
I
0.738
BAH79688
Xenopus laevis
BAH79688
I
0.738
A1L3F4
Xenopus laevis
A1L3F4
I
0.738
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.738
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.736
AAI28670
Xenopus laevis
AAI28670
I
0.736
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.730
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.730
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.730
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.730
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.727
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.721
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.721
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.721
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.721
MEX3C
Equus caballus
ENSECAG00000021727
I
0.721
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.721
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.721
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.721
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.721
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.721
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.721
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.721
MEX3C
Homo sapiens
ENSG00000176624
I
0.721
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.721
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.721
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.721
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.721
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.721
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.721
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.719
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.713
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.713
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.713
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.713
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.713
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.705
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.705
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.705