mex-3 (Caenorhabditis elegans)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 F53G12.5 T19777_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.835
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
F53G12.5a.1 KH 48 108
F53G12.5a.1 KH 138 197
F53G12.5a.2 KH 48 108
F53G12.5a.2 KH 138 197
F53G12.5b KH 79 139
F53G12.5b KH 166 225

Links

Other KH family RBPs
Other Caenorhabditis elegans RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CJA18034 Caenorhabditis japonica CJA18034 I 0.975
CRE03823 Caenorhabditis remanei CRE03823 I 0.967
CBN24563 Caenorhabditis brenneri CBN24563 I 0.959
CBN20397 Caenorhabditis brenneri CBN20397 I 0.959
CBG05100 Caenorhabditis briggsae CBG05100 I 0.950
GK13594 Drosophila willistoni FBgn0215602 I 0.843
GJ18673 Drosophila virilis FBgn0205827 I 0.843
GH23938 Drosophila grimshawi FBgn0131395 I 0.843
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.836
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.835
GE14558 Drosophila yakuba FBgn0232157 I 0.835
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.835
CG11360 Drosophila melanogaster FBgn0039920 D 0.835
GL18139 Drosophila persimilis FBgn0155742 I 0.835
GG16398 Drosophila erecta FBgn0108630 I 0.835
GD24410 Drosophila simulans FBgn0195748 I 0.835
GM26809 Drosophila sechellia FBgn0181661 I 0.835
MEX3C Equus caballus ENSECAG00000021727 I 0.828
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.828
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.828
MEX3C Homo sapiens ENSG00000176624 I 0.828
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.828
Mex3c Mus musculus ENSMUSG00000037253 I 0.828
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.828
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.828
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.828
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.828
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.828
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.828
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.828
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.828
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.828
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.828
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.828
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.828
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.826
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.826
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.826
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.826
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.826
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.826
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.826
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.826
MEX3A Bos taurus ENSBTAG00000019158 I 0.826
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.826
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.826
GF20555 Drosophila ananassae FBgn0097561 I 0.826
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.820
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.820
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.820
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.820
MEX3C Procavia capensis ENSPCAG00000009258 I 0.820
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.820
MEX3C Oryzias latipes ENSORLG00000004985 I 0.820
AAI30196 Xenopus laevis AAI30196 I 0.818
MEX3B Homo sapiens ENSG00000183496 I 0.811
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.811
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.811
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.811
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.811
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.811
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.811
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.811
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.811
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.811
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.811
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.811
AAI28670 Xenopus laevis AAI28670 I 0.811
A1L3F4 Xenopus laevis A1L3F4 I 0.811
AAI30070 Xenopus laevis AAI30070 I 0.811
MEX3C Canis familiaris ENSCAFG00000000162 I 0.811
BAH79688 Xenopus laevis BAH79688 I 0.811
MEX3B Bos taurus ENSBTAG00000016630 I 0.811
MEX3B Danio rerio ENSDARG00000058369 I 0.811
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.811
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.811
MEX3B Equus caballus ENSECAG00000013497 I 0.811
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.811
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.811
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.810
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.803
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.803
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.803
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.803
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.803
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.802
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.795
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.795
AAI42552 Xenopus laevis AAI42552 I 0.795
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.795
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.787
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.787
MEX3A Danio rerio ENSDARG00000076638 I 0.785
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.785
AAI30114 Xenopus laevis AAI30114 I 0.779
AAI33220 Xenopus laevis AAI33220 I 0.779
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.779
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.779
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.779
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.779
MEX3D Homo sapiens ENSG00000181588 I 0.779
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.779
Mex3d Mus musculus ENSMUSG00000048696 I 0.779
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.779
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.770
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.770
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.769
MEX3A Microcebus murinus ENSMICG00000002233 I 0.760
AGAP013259 Anopheles gambiae AGAP013259 I 0.744
Ppa-mex-3 Pristionchus pacificus PPA08528 N 0.744
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.744
AAEL012708 Aedes aegypti AAEL012708 I 0.744
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.744
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.736
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.736
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.719
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.705
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.702
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.702
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.702
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.702
MEX3C Microcebus murinus ENSMICG00000005815 I 0.702
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.702
MEX3C Sorex araneus ENSSARG00000006940 I 0.702
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.702