CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MEX3C
(
Ornithorhynchus anatinus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOANG00000008116
T19161_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.713
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000012900
KH
1
42
GCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREI
ENSOANP00000012900
KH
77
136
TVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI
Links
Other
KH
family RBPs
Other
Ornithorhynchus anatinus
RBPs
153 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
1.000
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
1.000
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.990
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.990
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.990
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.990
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.990
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.990
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.990
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.990
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.980
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.971
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.971
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.971
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.971
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.971
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.971
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.971
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.971
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.971
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.961
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.961
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.942
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.941
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.933
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.931
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.931
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.922
MEX3D
Felis catus
ENSFCAG00000002615
I
0.922
MEX3C
Danio rerio
ENSDARG00000068971
I
0.922
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.912
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.912
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.905
PHUM418100
Pediculus humanus
PHUM418100
I
0.903
MEX3D
Myotis lucifugus
ENSMLUG00000017018
N
0.885
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.864
MKNK2
Callithrix jacchus
ENSCJAG00000000539
I
0.858
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.854
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.850
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.843
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.843
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.843
e_gw1.312.50.1
Capitella teleta
e_gw1.312.50.1
I
0.843
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.843
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.843
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.843
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.843
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.843
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.843
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.843
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.843
MEX3C
Homo sapiens
ENSG00000176624
I
0.843
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.843
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.843
MEX3C
Equus caballus
ENSECAG00000021727
I
0.843
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.843
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.843
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.843
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.843
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.843
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.843
AAI28670
Xenopus laevis
AAI28670
I
0.842
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.842
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.837
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.837
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.837
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.837
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.835
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.835
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.835
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.829
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.826
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.819
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.819
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.818
MEX3B
Homo sapiens
ENSG00000183496
I
0.818
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.818
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.818
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.818
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.818
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.818
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.818
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.818
MEX3B
Equus caballus
ENSECAG00000013497
I
0.818
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.818
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.818
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.815
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.811
MEX3B
Danio rerio
ENSDARG00000058369
I
0.810
BAH79688
Xenopus laevis
BAH79688
I
0.810
AAI30070
Xenopus laevis
AAI30070
I
0.810
A1L3F4
Xenopus laevis
A1L3F4
I
0.810
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.810
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.802
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.802
143653
Helobdella robusta
143653
N
0.796
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.779
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.779
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.777
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.777
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.777
143355
Helobdella robusta
143355
N
0.777
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.770
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.769
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.769
AAI42552
Xenopus laevis
AAI42552
I
0.762
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.760
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.760
Ppa-mex-3
Pristionchus pacificus
PPA08528
N
0.760
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.754
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.752
MEX3D
Homo sapiens
ENSG00000181588
I
0.746
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.746
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.746
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.746
AAI30114
Xenopus laevis
AAI30114
I
0.746
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.746
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.746
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.746
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.746
AAI33220
Xenopus laevis
AAI33220
I
0.746
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.746
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.746
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.737
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.730
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.729
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.721
GH23938
Drosophila grimshawi
FBgn0131395
I
0.713
GL18139
Drosophila persimilis
FBgn0155742
I
0.713
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.713
CG11360
Drosophila melanogaster
FBgn0039920
D
0.713
GM26809
Drosophila sechellia
FBgn0181661
I
0.713
GG16398
Drosophila erecta
FBgn0108630
I
0.713
GD24410
Drosophila simulans
FBgn0195748
I
0.713
AAI30196
Xenopus laevis
AAI30196
I
0.713
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.713
GE14558
Drosophila yakuba
FBgn0232157
I
0.713
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.713
GJ18673
Drosophila virilis
FBgn0205827
I
0.713
GK13594
Drosophila willistoni
FBgn0215602
I
0.713
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.705
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.705
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.705
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.705
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.705
MEX3A
Danio rerio
ENSDARG00000076638
I
0.705
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.705
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.705
GF20555
Drosophila ananassae
FBgn0097561
I
0.705
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.705
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.705
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.705
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.705