CJA18034 (Caenorhabditis japonica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 CJA18034 T18312_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.810
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
CJA18034 KH 48 108
CJA18034 KH 138 197

Links

Other KH family RBPs
Other Caenorhabditis japonica RBPs

116 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mex-3 Caenorhabditis elegans F53G12.5 I 0.975
CRE03823 Caenorhabditis remanei CRE03823 I 0.967
CBN20397 Caenorhabditis brenneri CBN20397 I 0.959
CBN24563 Caenorhabditis brenneri CBN24563 I 0.959
CBG05100 Caenorhabditis briggsae CBG05100 I 0.950
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.820
GK13594 Drosophila willistoni FBgn0215602 I 0.818
GH23938 Drosophila grimshawi FBgn0131395 I 0.818
GJ18673 Drosophila virilis FBgn0205827 I 0.818
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.818
Mex3c Mus musculus ENSMUSG00000037253 I 0.811
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.811
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.811
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.811
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.811
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.811
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.811
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.811
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.811
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.811
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.811
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.811
MEX3C Equus caballus ENSECAG00000021727 I 0.811
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.811
MEX3C Homo sapiens ENSG00000176624 I 0.811
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.811
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.811
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.811
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.810
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.810
CG11360 Drosophila melanogaster FBgn0039920 D 0.810
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.810
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.810
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.810
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.810
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.810
GG16398 Drosophila erecta FBgn0108630 I 0.810
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.810
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.810
MEX3A Bos taurus ENSBTAG00000019158 I 0.810
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.810
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.810
GD24410 Drosophila simulans FBgn0195748 I 0.810
GE14558 Drosophila yakuba FBgn0232157 I 0.810
GL18139 Drosophila persimilis FBgn0155742 I 0.810
GM26809 Drosophila sechellia FBgn0181661 I 0.810
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.803
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.803
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.803
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.803
MEX3C Oryzias latipes ENSORLG00000004985 I 0.803
MEX3C Procavia capensis ENSPCAG00000009258 I 0.803
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.803
GF20555 Drosophila ananassae FBgn0097561 I 0.802
AAI30196 Xenopus laevis AAI30196 I 0.802
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.795
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.795
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.795
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.795
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.795
MEX3B Danio rerio ENSDARG00000058369 I 0.795
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.795
MEX3B Equus caballus ENSECAG00000013497 I 0.795
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.795
BAH79688 Xenopus laevis BAH79688 I 0.795
MEX3B Homo sapiens ENSG00000183496 I 0.795
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.795
MEX3C Canis familiaris ENSCAFG00000000162 I 0.795
MEX3B Bos taurus ENSBTAG00000016630 I 0.795
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.795
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.795
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.795
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.795
A1L3F4 Xenopus laevis A1L3F4 I 0.795
AAI28670 Xenopus laevis AAI28670 I 0.795
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.795
AAI30070 Xenopus laevis AAI30070 I 0.795
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.795
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.795
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.793
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.787
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.787
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.787
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.787
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.787
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.787
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.785
AAI42552 Xenopus laevis AAI42552 I 0.779
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.779
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.779
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.779
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.777
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.770
AAI33220 Xenopus laevis AAI33220 I 0.770
AAI30114 Xenopus laevis AAI30114 I 0.770
MEX3A Danio rerio ENSDARG00000076638 I 0.769
MEX3D Homo sapiens ENSG00000181588 I 0.762
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.762
Mex3d Mus musculus ENSMUSG00000048696 I 0.762
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.762
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.762
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.762
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.762
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.762
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.762
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.760
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.754
Ppa-mex-3 Pristionchus pacificus PPA08528 N 0.752
MEX3A Microcebus murinus ENSMICG00000002233 I 0.744
AAEL012708 Aedes aegypti AAEL012708 I 0.744
AGAP013259 Anopheles gambiae AGAP013259 I 0.744
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.744
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.744
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.727
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.727
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.711