Medtr3g140110 (Medicago truncatula)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Medtr3g140110 T21422_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr3g140110.1 KH 87 152
Medtr3g140110.1 KH 179 245

Links

Other KH family RBPs
Other Medicago truncatula RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr3g140090 Medicago truncatula Medtr3g140090 N 0.992
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.902
Medtr1g020830 Medicago truncatula Medtr1g020830 N 0.872
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.872
Glyma14g10670.1 Glycine max Glyma14g10670.1 N 0.865
Glyma17g34850.1 Glycine max Glyma17g34850.1 N 0.865
PK01594.1 Cannabis sativa PK01594.1 N 0.850
LjSGA_026050.1 Lotus japonicus LjSGA_026050.1 N 0.842
Glyma04g05330.1 Glycine max Glyma04g05330.1 N 0.842
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.842
MDP0000222202 Malus x domestica MDP0000222202 N 0.820
29794.m003342 Ricinus communis 29794.m003342 N 0.812
mgf005239m Mimulus guttatus mgf005239m N 0.805
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.805
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.805
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.805
MDP0000302754 Malus x domestica MDP0000302754 N 0.805
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.797
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.797
ppa002323m Prunus persica ppa002323m N 0.797
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.797
mgf008502m Mimulus guttatus mgf008502m N 0.782
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.782
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.774
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.774
SB04G007950 Sorghum bicolor Sb04g007950 N 0.774
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.767
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.759
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.752
MDP0000379391 Malus x domestica MDP0000379391 N 0.738
Cucsa.220100 Cucumis sativus Cucsa.220100 N 0.714