LjSGA_026050.1 (Lotus japonicus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LjSGA_026050.1 T21784_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_026050.1 KH 21 86
LjSGA_026050.1 KH 114 180

Links

Other KH family RBPs
Other Lotus japonicus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr1g020830 Medicago truncatula Medtr1g020830 N 0.880
Glyma06g05400.1 Glycine max Glyma06g05400.1 N 0.865
Glyma14g10670.1 Glycine max Glyma14g10670.1 N 0.850
Glyma17g34850.1 Glycine max Glyma17g34850.1 N 0.850
Medtr3g140110 Medicago truncatula Medtr3g140110 N 0.842
Cucsa.395190 Cucumis sativus Cucsa.395190 N 0.842
GSVIVG00035354001 Vitis vinifera GSVIVG00035354001 N 0.835
Medtr3g140090 Medicago truncatula Medtr3g140090 N 0.835
PK01594.1 Cannabis sativa PK01594.1 N 0.812
B9INI7_POPTR Populus trichocarpa POPTR_0018s05020 N 0.812
MDP0000302754 Malus x domestica MDP0000302754 N 0.805
cassava30216.valid.m1 Manihot esculenta cassava30216.valid.m1 N 0.797
cassava30219.valid.m1 Manihot esculenta cassava30219.valid.m1 N 0.797
cassava30217.valid.m1 Manihot esculenta cassava30217.valid.m1 N 0.797
Glyma04g05330.1 Glycine max Glyma04g05330.1 N 0.789
MDP0000222202 Malus x domestica MDP0000222202 N 0.789
AT2G25970 Arabidopsis thaliana AT2G25970-TAIR-G N 0.789
XM_002880683.1 Arabidopsis lyrata fgenesh2_kg.4__512__AT2G25970.1 N 0.789
ppa002323m Prunus persica ppa002323m N 0.782
mgf005239m Mimulus guttatus mgf005239m N 0.782
BRADI3G08410 Brachypodium distachyon BRADI3G08410 N 0.782
mgf008502m Mimulus guttatus mgf008502m N 0.774
29794.m003342 Ricinus communis 29794.m003342 N 0.774
LOC_Os02g13130 Oryza sativa LOC_Os02g13130 N 0.759
BGIOSIBCE006191 Oryza indica BGIOSIBCE006191 N 0.759
PDK_20s1621601g001 Phoenix dactylifera PDK_20s1621601g001 N 0.759
GRMZM2G177781 Zea mays GRMZM2G177781 N 0.752
GRMZM2G162992 Zea mays GRMZM2G162992 N 0.744
MDP0000379391 Malus x domestica MDP0000379391 N 0.738
SB04G007950 Sorghum bicolor Sb04g007950 N 0.737
cassava29872.valid.m1 Manihot esculenta cassava29872.valid.m1 N 0.707
29780.m001319 Ricinus communis 29780.m001319 N 0.707