CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pa_3_1680
(
Podospora anserina
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Pa_3_1680
T21907_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pa_3_1680
KH
183
231
GRAIGRIAGKDGKMKFAIENATKTRVVLAGSRVHILGAFENIGMARESI
Links
Other
KH
family RBPs
Other
Podospora anserina
RBPs
64 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCU07956
Neurospora crassa
NCU07956
N
0.939
estExt_Genewise1Plus.C_430054
Neurospora tetrasperma
estExt_Genewise1Plus.C_430054
N
0.939
e_gw1.3.666.1
Neurospora discreta
e_gw1.3.666.1
N
0.939
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.920
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.900
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.776
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.776
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.776
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.776
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.776
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.776
GLRG_03940
Colletotrichum graminicola
GLRG_03940
N
0.769
MCYG_07269
Microsporum canis
MCYG_07269
N
0.755
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.755
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.755
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.755
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.755
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.755
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.755
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.755
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.755
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.755
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.755
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.740
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.740
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.740
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.740
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.740
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.740
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.735
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.735
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.735
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.725
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.720
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.720
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.720
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.720
PMAA_046470
Penicillium marneffei
PMAA_046470
N
0.720
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.720
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.720
orf19.7618
Candida albicans
orf19.7618
N
0.720
PNO1
Ashbya gossypii
PNO1
N
0.720
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.720
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.720
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.720
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.720
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.720
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.720
PTSG_04415
Salpingoeca rosetta
PTSG_04415
N
0.720
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.720
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.720
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.720
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.720
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.714
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.700
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.700
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.700
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.700
estExt_fgenesh5_pg.C_40050
Trichoderma reesei
estExt_fgenesh5_pg.C_40050
N
0.700
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.700
estExt_Genewise1Plus.C_91132
Trichoderma virens
estExt_Genewise1Plus.C_91132
N
0.700
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.700
fgenesh1_pm.C_scaffold_14000035
Trichoderma atroviride
fgenesh1_pm.C_scaffold_14000035
N
0.700
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.700