CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FGSG_01345
(
Fusarium graminearum
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
FGSG_01345
T17642_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FGSG_01345T0
KH
179
228
QARAIGRIAGKDGKTKFAIENASRTRIVLADSKIHILGGFKNIHLARESV
Links
Other
KH
family RBPs
Other
Fusarium graminearum
RBPs
178 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
1.000
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
1.000
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
1.000
estExt_Genewise1Plus.C_91132
Trichoderma virens
estExt_Genewise1Plus.C_91132
N
0.920
fgenesh1_pm.C_scaffold_14000035
Trichoderma atroviride
fgenesh1_pm.C_scaffold_14000035
N
0.920
estExt_fgenesh5_pg.C_40050
Trichoderma reesei
estExt_fgenesh5_pg.C_40050
N
0.920
e_gw1.3.2749.1
Cryphonectria parasitica
e_gw1.3.2749.1
N
0.900
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.900
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.880
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.880
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.880
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.880
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.880
estExt_Genewise1Plus.C_chr_70397
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70397
N
0.860
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.860
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.860
e_gw1.3.1059.1
Mycosphaerella fijiensis
e_gw1.3.1059.1
N
0.860
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.860
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.860
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.860
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.860
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.860
GLRG_03940
Colletotrichum graminicola
GLRG_03940
N
0.846
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.843
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.840
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.840
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.840
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.840
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.840
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.840
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.840
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.840
orf19.7618
Candida albicans
orf19.7618
N
0.840
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.840
MCYG_07269
Microsporum canis
MCYG_07269
N
0.840
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.840
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.840
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.840
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.840
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.840
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.840
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.840
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.840
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.840
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.840
PNO1
Ashbya gossypii
PNO1
N
0.820
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.820
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.820
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.820
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.820
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.820
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.820
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.820
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.800
rbp28
Schizosaccharomyces pombe
SPAC2C4.11c
N
0.800
MGG_05136
Magnaporthe oryzae
MGG_05136
N
0.800
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.800
estExt_Genewise1Plus.C_430054
Neurospora tetrasperma
estExt_Genewise1Plus.C_430054
N
0.780
estExt_Genewise1Plus.C_250095
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_250095
N
0.780
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.780
estExt_Genewise1Plus.C_10658
Mucor circinelloides
estExt_Genewise1Plus.C_10658
N
0.780
e_gw1.3.666.1
Neurospora discreta
e_gw1.3.666.1
N
0.780
NCU07956
Neurospora crassa
NCU07956
N
0.780
fgenesh3_pm.54__15
Postia placenta
fgenesh3_pm.54__15
N
0.760
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.760
SPOG_00402
Schizosaccharomyces cryophilus
SPOG_00402
N
0.760
e_gww2.1.865.1
Phanerochaete chrysosporium
e_gww2.1.865.1
N
0.760
SOCG_04140
Schizosaccharomyces octosporus
SOCG_04140
N
0.760
SJAG_03872
Schizosaccharomyces japonicus
SJAG_03872
N
0.760
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.760
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.760
VDAG_03212
Verticillium dahliae
VDAG_03212
N
0.750
e_gw1.8.261.1
Sporobolomyces roseus
e_gw1.8.261.1
N
0.740
e_gw1.2.2126.1
Schizophyllum commune
e_gw1.2.2126.1
N
0.740
gw1.1.2472.1
Pleurotus ostreatus
gw1.1.2472.1
N
0.740
AMAG_12889
Allomyces macrogynus
AMAG_12889
N
0.740
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.740
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.740
EDP42908.1
Malassezia globosa
EDP42908.1
N
0.740
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.740
AMAG_14219
Allomyces macrogynus
AMAG_14219
N
0.740
UM03495
Ustilago maydis
UM03495
N
0.740
LjSGA_017760.2
Lotus japonicus
LjSGA_017760.2
N
0.740
e_gw1.12.287.1
Serpula lacrymans
e_gw1.12.287.1
N
0.740
PTTG_01898
Puccinia triticina
PTTG_01898
N
0.740
3712.m00082
Tetrahymena thermophila
3712.m00082
N
0.740
s_468317
Phytophthora sojae
s_468317
N
0.720
Glyma18g08100.1
Glycine max
Glyma18g08100.1
N
0.720
fgenesh1_pm.C_scaffold_5000030
Phytophthora ramorum
fgenesh1_pm.C_scaffold_5000030
N
0.720
fgenesh_newKGs_pm.139__21
Emiliania huxleyi
fgenesh_newKGs_pm.139__21
N
0.720
Glyma08g44800.1
Glycine max
Glyma08g44800.1
N
0.720
Glyma18g08080.1
Glycine max
Glyma18g08080.1
N
0.720
e_gwh1.2.512.1
Laccaria bicolor
e_gwh1.2.512.1
N
0.720
Pa_3_1680
Podospora anserina
Pa_3_1680
N
0.720
ANIA_05785
Aspergillus nidulans
CADANIAG00003265
N
0.720
SPRG_02415
Saprolegnia parasitica
SPRG_02415
N
0.720
CNBG_1323
Cryptococcus neoformans
CNBG_1323
N
0.720
PNO1
Taeniopygia guttata
ENSTGUG00000002369
N
0.720
ATEG_07413
Aspergillus terreus
CADATEAG00001505
N
0.720
PITG_01680
Phytophthora infestans
PITG_01680
N
0.720
estExt_fgenesh2_kg.C_20130
Agaricus bisporus
estExt_fgenesh2_kg.C_20130
N
0.720
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.720
e_gw1.2.756.1
Heterobasidion annosum
e_gw1.2.756.1
N
0.720
AO090003000014
Aspergillus oryzae
CADAORAG00000701
N
0.706
AFLA_037860
Aspergillus flavus
CADAFLAG00003159
N
0.706
l(1)G0004
Drosophila melanogaster
FBgn0027334
N
0.706
GM23025
Drosophila sechellia
FBgn0177893
N
0.706
GD17488
Drosophila simulans
FBgn0189040
N
0.706
GG19285
Drosophila erecta
FBgn0111489
N
0.706
GI11042
Drosophila mojavensis
FBgn0133805
N
0.706
GF20246
Drosophila ananassae
FBgn0097253
N
0.706
GE17874
Drosophila yakuba
FBgn0068478
N
0.706
AAQ24169
Xenopus laevis
AAQ24169
N
0.700
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.700
AMSG_02733
Thecamonas trahens
AMSG_02733
N
0.700
AAH42279
Xenopus laevis
AAH42279
N
0.700
ppa011086m
Prunus persica
ppa011086m
N
0.700
MDP0000136407
Malus x domestica
MDP0000136407
N
0.700
MDP0000265633
Malus x domestica
MDP0000265633
N
0.700
MDP0000120063
Malus x domestica
MDP0000120063
N
0.700
e_gw1.15.315.1
Tremella mesenterica
e_gw1.15.315.1
N
0.700
estExt_fgenesh1_pg.C_190237
Phytophthora capsici
estExt_fgenesh1_pg.C_190237
N
0.700
MDP0000754021
Malus x domestica
MDP0000754021
N
0.700
ppa009897m
Prunus persica
ppa009897m
N
0.700
XP_791733.2
Strongylocentrotus purpuratus
XP_791733.2
N
0.700
XP_002162789.1
Hydra magnipapillata
XP_002162789.1
N
0.700
XP_001202160.1
Strongylocentrotus purpuratus
XP_001202160.1
N
0.700
XP_001202155.1
Strongylocentrotus purpuratus
XP_001202155.1
N
0.700
XP_798188.2
Strongylocentrotus purpuratus
XP_798188.2
N
0.700
Chlre2_kg.scaffold_20000177
Chlamydomonas reinhardtii
Chlre2_kg.scaffold_20000177
N
0.700
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.700
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.700
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.700
PNO1
Homo sapiens
ENSG00000115946
N
0.700
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.700
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.700
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.700
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.700
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.700
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.700
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.700
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.700
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.700
nasonia_NCBI_hmm120183
Nasonia vitripennis
nasonia_NCBI_hmm120183
N
0.700
amel4_ncbi_hmm14037
Apis mellifera
amel4_ncbi_hmm14037
N
0.700
PK08146.1
Cannabis sativa
PK08146.1
N
0.700
SPPG_04498
Spizellomyces punctatus
SPPG_04498
N
0.700
ACLA_088200
Aspergillus clavatus
CADACLAG00008695
N
0.700
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.700
pno1
Danio rerio
ENSDARG00000008502
N
0.700
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.700
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.700
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.700
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.700
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.700
Cucsa.041830
Cucumis sativus
Cucsa.041830
N
0.700
cassava30594.valid.m1
Manihot esculenta
cassava30594.valid.m1
N
0.700
28525.m000262
Ricinus communis
28525.m000262
N
0.700
B9N5M8_POPTR
Populus trichocarpa
POPTR_0011s16880
N
0.700
Cucsa.201760
Cucumis sativus
Cucsa.201760
N
0.700
e_gw1.18.222.1
Chlorella NC64A
e_gw1.18.222.1
N
0.700
Medtr3g080390
Medicago truncatula
Medtr3g080390
N
0.700
GP3.070330
Batrachochytrium dendrobatidis
GP3.070330
N
0.700
estExt_Genewise1Plus.C_600117
Volvox carteri
estExt_Genewise1Plus.C_600117
N
0.700
estExt_Genewise1.C_260084
Melampsora laricis populina
estExt_Genewise1.C_260084
N
0.700
B9GHH7_POPTR
Populus trichocarpa
POPTR_0001s47320
N
0.700
PHUM356890
Pediculus humanus
PHUM356890
N
0.700
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.700
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.700
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.700
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.700
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.700
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.700
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.700
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.700
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.700
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.700
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.700