estExt_fgenesh1_kg.C_140013 (Cochliobolus heterostrophus C5)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 estExt_fgenesh1_kg.C_140013 T20820_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_140013 KH 183 232

Links

Other KH family RBPs
Other Cochliobolus heterostrophus C5 RBPs

220 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTRG_02803 Pyrenophora tritici repentis PTRG_02803 N 0.940
Pc14g01220 Penicillium chrysogenum Pc14g01220 N 0.920
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.900
FGSG_01345 Fusarium graminearum FGSG_01345 N 0.900
e_gw1.3.1059.1 Mycosphaerella fijiensis e_gw1.3.1059.1 N 0.900
SS1G_04290 Sclerotinia sclerotiorum SS1G_04290 N 0.900
FVEG_01480 Fusarium verticillioides FVEG_01480 N 0.900
FOXG_00036 Fusarium oxysporum FOXG_00036 N 0.900
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00036 N 0.900
BC1G_12211 Botrytis cinerea BC1G_12211 N 0.900
estExt_fgenesh5_pg.C_40050 Trichoderma reesei estExt_fgenesh5_pg.C_40050 N 0.880
TESG_04215 Trichophyton tonsurans TESG_04215 N 0.880
EAT88982.1 Phaeosphaeria nodorum EAT88982.1 N 0.880
TEQG_07954 Trichophyton equinum TEQG_07954 N 0.880
SNOG_03777 Stagonospora nodorum SNOG_03777 N 0.880
MGYG_04767 Microsporum gypseum MGYG_04767 N 0.880
MCYG_07269 Microsporum canis MCYG_07269 N 0.880
HCAG_04100 Histoplasma capsulatum HCAG_04100 N 0.880
TRV_03730 Trichophyton verrucosum TRV_03730 N 0.880
TERG_01665 Trichophyton rubrum TERG_01665 N 0.880
ARB_00984 Arthroderma benhamiae ARB_00984 N 0.880
estExt_Genewise1Plus.C_91132 Trichoderma virens estExt_Genewise1Plus.C_91132 N 0.880
fgenesh1_pm.C_scaffold_14000035 Trichoderma atroviride fgenesh1_pm.C_scaffold_14000035 N 0.880
CPSG_08784 Coccidioides posadasii CPSG_08784 N 0.880
CIMG_07268 Coccidioides immitis CIMG_07268 N 0.880
Skud_Contig1833.8 Saccharomyces kudriavzevii Skud_Contig1833.8 N 0.860
e_gw1.3.2749.1 Cryphonectria parasitica e_gw1.3.2749.1 N 0.860
PABG_01374 Paracoccidioides brasiliensis PABG_01374 N 0.860
PNO1 Saccharomyces cerevisiae YOR145C N 0.860
20872_YOR145C Saccharomyces paradoxus 20872_YOR145C N 0.860
KLLA0C06446g Kluyveromyces lactis KLLA0C06446g N 0.860
KLTH0G02574g Kluyveromyces thermotolerans KLTH0G02574g N 0.860
Kwal_18864 Kluyveromyces waltii Kwal_18864 N 0.860
UREG_07832 Uncinocarpus reesii UREG_07832 N 0.860
YALI0E01122g Yarrowia lipolytica YALI0E01122g N 0.860
BDBG_01721 Blastomyces dermatitidis BDBG_01721 N 0.860
20359_YOR145C Saccharomyces mikatae 20359_YOR145C N 0.843
orf19.7618 Candida albicans orf19.7618 N 0.840
SAKL0G03740g Lachancea kluyveri SAKL0G03740g N 0.840
ZYRO0D11440g Zygosaccharomyces rouxii ZYRO0D11440g N 0.840
CLUG_01545 Candida lusitaniae CLUG_01545 N 0.840
CTRG_05813 Candida tropicalis CTRG_05813 N 0.840
DEHA0G05258g Debaryomyces hansenii DEHA0G05258g N 0.840
CPAG_01545 Candida parapsilosis CPAG_01545 N 0.840
LELG_05249 Lodderomyces elongisporus LELG_05249 N 0.840
23888_YOR145C Saccharomyces bayanus 23888_YOR145C N 0.840
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.840
A7THL8_VANPO Vanderwaltozyma polyspora A7THL8_VANPO N 0.840
Cd36_35296 Candida dubliniensis Cd36_35296 N 0.840
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.840
CAGL0K09460g Candida glabrata CAGL0K09460g N 0.840
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.840
estExt_genewise1_human.C_chr_1.20929 Pichia stipitis estExt_genewise1_human.C_chr_1.20929 N 0.840
GLRG_03940 Colletotrichum graminicola GLRG_03940 N 0.827
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.820
rbp28 Schizosaccharomyces pombe SPAC2C4.11c N 0.820
PNO1 Ashbya gossypii PNO1 N 0.820
estExt_Genewise1Plus.C_10659 Myceliophthora thermophila estExt_Genewise1Plus.C_10659 N 0.820
SPOG_00402 Schizosaccharomyces cryophilus SPOG_00402 N 0.820
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.820
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.820
SJAG_03872 Schizosaccharomyces japonicus SJAG_03872 N 0.800
ATEG_07413 Aspergillus terreus CADATEAG00001505 N 0.800
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.800
estExt_Genewise1.C_10689 Thielavia terrestris estExt_Genewise1.C_10689 N 0.800
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.800
EDP42908.1 Malassezia globosa EDP42908.1 N 0.800
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.800
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.800
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.780
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.780
PITG_01680 Phytophthora infestans PITG_01680 N 0.780
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.780
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.780
SOCG_04140 Schizosaccharomyces octosporus SOCG_04140 N 0.780
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.780
ACLA_088200 Aspergillus clavatus CADACLAG00008695 N 0.780
PTTG_01898 Puccinia triticina PTTG_01898 N 0.780
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.780
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.780
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.780
MGG_05136 Magnaporthe oryzae MGG_05136 N 0.780
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.780
s_468317 Phytophthora sojae s_468317 N 0.780
Glyma08g44800.1 Glycine max Glyma08g44800.1 N 0.780
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.780
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.780
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.780
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.780
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.780
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.780
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.780
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.780
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.780
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.780
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.780
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.760
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.760
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.760
PNO1 Homo sapiens ENSG00000115946 N 0.760
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.760
PNO1 Canis familiaris ENSCAFG00000003256 N 0.760
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.760
ANIA_05785 Aspergillus nidulans CADANIAG00003265 N 0.760
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.760
PNO1 Microcebus murinus ENSMICG00000010897 N 0.760
LOC100061904 Equus caballus ENSECAG00000011263 N 0.760
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.760
pno1 Danio rerio ENSDARG00000008502 N 0.760
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.760
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.760
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.760
PNO1 Sus scrofa ENSSSCG00000008352 N 0.760
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.760
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.760
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.760
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.760
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.760
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.760
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.760
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.760
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.760
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.760
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.760
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.760
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.760
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.760
PNO1 Procavia capensis ENSPCAG00000016146 N 0.760
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.760
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.760
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.760
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.760
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.760
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.760
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.760
PMAA_046470 Penicillium marneffei PMAA_046470 N 0.760
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.760
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.760
UM03495 Ustilago maydis UM03495 N 0.760
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.760
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.760
AFLA_037860 Aspergillus flavus CADAFLAG00003159 N 0.745
AO090003000014 Aspergillus oryzae CADAORAG00000701 N 0.745
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.740
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.740
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.740
MDP0000754021 Malus x domestica MDP0000754021 N 0.740
Pno1 Mus musculus ENSMUSG00000020116 N 0.740
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.740
MDP0000136407 Malus x domestica MDP0000136407 N 0.740
MDP0000265633 Malus x domestica MDP0000265633 N 0.740
ppa009897m Prunus persica ppa009897m N 0.740
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.740
estExt_Genewise1Plus.C_430054 Neurospora tetrasperma estExt_Genewise1Plus.C_430054 N 0.740
Q8AVH4 Xenopus laevis Q8AVH4 N 0.740
AAQ24169 Xenopus laevis AAQ24169 N 0.740
e_gw1.3.666.1 Neurospora discreta e_gw1.3.666.1 N 0.740
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.740
AAH42279 Xenopus laevis AAH42279 N 0.740
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.740
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.740
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.740
NCU07956 Neurospora crassa NCU07956 N 0.740
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.740
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.740
28525.m000262 Ricinus communis 28525.m000262 N 0.740
ppa011086m Prunus persica ppa011086m N 0.740
MDP0000120063 Malus x domestica MDP0000120063 N 0.740
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.740
AFUA_6G06430 Aspergillus fumigatus CADAFUAG00001979 N 0.740
NFIA_052070 Neosartorya fischeri CADNFIAG00004473 N 0.740
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.740
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.740
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.740
PK08146.1 Cannabis sativa PK08146.1 N 0.740
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.740
VDAG_03212 Verticillium dahliae VDAG_03212 N 0.731
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.720
mgf006621m Mimulus guttatus mgf006621m N 0.720
PHUM356890 Pediculus humanus PHUM356890 N 0.720
SB03G036840 Sorghum bicolor Sb03g036840 N 0.720
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.720
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.720
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.720
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.720
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.720
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.720
An18g06710 Aspergillus niger CADANGAG00014311 N 0.720
fgenesh1_kg.C_scaffold_5000048 Selaginella moellendorfii fgenesh1_kg.C_scaffold_5000048 N 0.720
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.720
Pa_3_1680 Podospora anserina Pa_3_1680 N 0.720
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.720
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.720
fgenesh1_pm.00129_#_16 Aspergillus carbonarius fgenesh1_pm.00129_#_16 N 0.720
LOAG_05624 Loa loa LOAG_05624 N 0.720
Bm1_42995 Brugia malayi Bm1_42995 N 0.720
PDK_20s1552091g001 Phoenix dactylifera PDK_20s1552091g001 N 0.720
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.720
Medtr5g095530 Medicago truncatula Medtr5g095530 N 0.720
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.720
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.700
e_gw1.18.222.1 Chlorella NC64A e_gw1.18.222.1 N 0.700
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.700
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.700
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.700
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.700
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.700
AT3G13230 Arabidopsis thaliana AT3G13230-TAIR-G N 0.700
e_gw1.4.614.1 Micromonas pusilla e_gw1.4.614.1 N 0.700
EDO07242.1 Babesia bovis EDO07242.1 N 0.700
THAPSDRAFT_35041 Thalassiosira pseudonana Thaps35041 N 0.700
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.700
XM_002882767.1 Arabidopsis lyrata scaffold_301521.1 N 0.700
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.700
CNBG_1323 Cryptococcus neoformans CNBG_1323 N 0.700
194870 Helobdella robusta 194870 N 0.700
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.700
PHATRDRAFT_9929 Phaeodactylum tricornutum Phatr9929 N 0.700
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.700
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.700