CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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e_gw1.3.666.1
(
Neurospora discreta
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
e_gw1.3.666.1
T20773_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.3.666.1
KH
51
99
GRAIGRIAGKDGKTKFAIENATKTRIVLAGSRVHILGAFENIGMARESV
Links
Other
KH
family RBPs
Other
Neurospora discreta
RBPs
114 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCU07956
Neurospora crassa
NCU07956
N
1.000
estExt_Genewise1Plus.C_430054
Neurospora tetrasperma
estExt_Genewise1Plus.C_430054
N
1.000
estExt_Genewise1.C_10689
Thielavia terrestris
estExt_Genewise1.C_10689
N
0.940
Pa_3_1680
Podospora anserina
Pa_3_1680
N
0.939
estExt_Genewise1Plus.C_10659
Myceliophthora thermophila
estExt_Genewise1Plus.C_10659
N
0.920
Skud_Contig1833.8
Saccharomyces kudriavzevii
Skud_Contig1833.8
N
0.800
20872_YOR145C
Saccharomyces paradoxus
20872_YOR145C
N
0.800
Kwal_18864
Kluyveromyces waltii
Kwal_18864
N
0.800
KLTH0G02574g
Kluyveromyces thermotolerans
KLTH0G02574g
N
0.800
KLLA0C06446g
Kluyveromyces lactis
KLLA0C06446g
N
0.800
PNO1
Saccharomyces cerevisiae
YOR145C
N
0.800
GLRG_03940
Colletotrichum graminicola
GLRG_03940
N
0.788
20359_YOR145C
Saccharomyces mikatae
20359_YOR145C
N
0.784
Cd36_35296
Candida dubliniensis
Cd36_35296
N
0.780
CAGL0K09460g
Candida glabrata
CAGL0K09460g
N
0.780
CTRG_05813
Candida tropicalis
CTRG_05813
N
0.780
FVEG_01480
Fusarium verticillioides
FVEG_01480
N
0.780
FOXG_00036
Fusarium oxysporum
FOXG_00036
N
0.780
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00036
N
0.780
LELG_05249
Lodderomyces elongisporus
LELG_05249
N
0.780
A7THL8_VANPO
Vanderwaltozyma polyspora
A7THL8_VANPO
N
0.780
CLUG_01545
Candida lusitaniae
CLUG_01545
N
0.780
DEHA0G05258g
Debaryomyces hansenii
DEHA0G05258g
N
0.780
CPAG_01545
Candida parapsilosis
CPAG_01545
N
0.780
FGSG_01345
Fusarium graminearum
FGSG_01345
N
0.780
SAKL0G03740g
Lachancea kluyveri
SAKL0G03740g
N
0.780
orf19.7618
Candida albicans
orf19.7618
N
0.780
23888_YOR145C
Saccharomyces bayanus
23888_YOR145C
N
0.780
estExt_genewise1_human.C_chr_1.20929
Pichia stipitis
estExt_genewise1_human.C_chr_1.20929
N
0.780
GSTUMT00003923001
Tuber melanosporum
GSTUMT00003923001
N
0.776
ZYRO0D11440g
Zygosaccharomyces rouxii
ZYRO0D11440g
N
0.760
PGUG_02960
Candida guilliermondii
PGUG_02960
N
0.760
estExt_fgenesh5_pg.C_40050
Trichoderma reesei
estExt_fgenesh5_pg.C_40050
N
0.760
Scas_Contig632.19
Saccharomyces castellii
Scas_Contig632.19
N
0.760
fgenesh1_pm.C_scaffold_14000035
Trichoderma atroviride
fgenesh1_pm.C_scaffold_14000035
N
0.760
PNO1
Ashbya gossypii
PNO1
N
0.760
estExt_Genewise1Plus.C_91132
Trichoderma virens
estExt_Genewise1Plus.C_91132
N
0.760
YALI0E01122g
Yarrowia lipolytica
YALI0E01122g
N
0.755
EAT88982.1
Phaeosphaeria nodorum
EAT88982.1
N
0.755
e_gw1.3.2749.1
Cryphonectria parasitica
e_gw1.3.2749.1
N
0.755
PTRG_02803
Pyrenophora tritici repentis
PTRG_02803
N
0.755
SNOG_03777
Stagonospora nodorum
SNOG_03777
N
0.755
SS1G_04290
Sclerotinia sclerotiorum
SS1G_04290
N
0.755
BC1G_12211
Botrytis cinerea
BC1G_12211
N
0.755
estExt_fgenesh1_kg.C_140013
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_140013
N
0.740
e_gw1.3.1059.1
Mycosphaerella fijiensis
e_gw1.3.1059.1
N
0.740
PTSG_04415
Salpingoeca rosetta
PTSG_04415
N
0.740
estExt_Genewise1Plus.C_chr_70397
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70397
N
0.740
MCYG_07269
Microsporum canis
MCYG_07269
N
0.735
TEQG_07954
Trichophyton equinum
TEQG_07954
N
0.735
TRV_03730
Trichophyton verrucosum
TRV_03730
N
0.735
TESG_04215
Trichophyton tonsurans
TESG_04215
N
0.735
TERG_01665
Trichophyton rubrum
TERG_01665
N
0.735
MGYG_04767
Microsporum gypseum
MGYG_04767
N
0.735
ARB_00984
Arthroderma benhamiae
ARB_00984
N
0.735
Pc14g01220
Penicillium chrysogenum
Pc14g01220
N
0.735
CIMG_07268
Coccidioides immitis
CIMG_07268
N
0.735
HCAG_04100
Histoplasma capsulatum
HCAG_04100
N
0.735
CPSG_08784
Coccidioides posadasii
CPSG_08784
N
0.735
PNO1
Anolis carolinensis
ENSACAG00000001218
N
0.720
PNO1
Tetraodon nigroviridis
ENSTNIG00000009825
N
0.720
PNO1
Gasterosteus aculeatus
ENSGACG00000012047
N
0.720
PNO1
Takifugu rubripes
ENSTRUG00000012470
N
0.720
BDBG_01721
Blastomyces dermatitidis
BDBG_01721
N
0.714
MGG_05136
Magnaporthe oryzae
MGG_05136
N
0.714
PABG_01374
Paracoccidioides brasiliensis
PABG_01374
N
0.714
fgenesh_newKGs_pm.139__21
Emiliania huxleyi
fgenesh_newKGs_pm.139__21
N
0.714
UREG_07832
Uncinocarpus reesii
UREG_07832
N
0.714
estExt_Genewise1Plus.C_250095
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_250095
N
0.714
XM_001095777.1
Macaca mulatta
ENSMMUG00000030357
N
0.700
PNO1
Ochotona princeps
ENSOPRG00000009643
N
0.700
Q6VBQ6_ORYLA
Oryzias latipes
ENSORLG00000002371
N
0.700
PNO1
Monodelphis domestica
ENSMODG00000003567
N
0.700
ENSOCUG00000022236
Oryctolagus cuniculus
ENSOCUG00000022236
N
0.700
Pno1
Mus musculus
ENSMUSG00000020116
N
0.700
PNO1
Procavia capensis
ENSPCAG00000016146
N
0.700
ENSOCUG00000006100
Oryctolagus cuniculus
ENSOCUG00000006100
N
0.700
PNO1
Ornithorhynchus anatinus
ENSOANG00000008388
N
0.700
PNO1
Pteropus vampyrus
ENSPVAG00000012695
N
0.700
PNO1
Tursiops truncatus
ENSTTRG00000014002
N
0.700
estExt_Genewise1Plus.C_10658
Mucor circinelloides
estExt_Genewise1Plus.C_10658
N
0.700
PNO1
Vicugna pacos
ENSVPAG00000012083
N
0.700
pno1
Xenopus tropicalis
ENSXETG00000017349
N
0.700
Q7YRC8_MACMU
Macaca mulatta
ENSMMUG00000017461
N
0.700
estExt_fgenesh1_pg.C_110137
Monosiga brevicollis
estExt_fgenesh1_pg.C_110137
N
0.700
PNO1
Pan troglodytes
ENSPTRG00000011999
N
0.700
XM_002882767.1
Arabidopsis lyrata
scaffold_301521.1
N
0.700
Pno1
Rattus norvegicus
ENSRNOG00000005524
N
0.700
PNO1
Sus scrofa
ENSSSCG00000008352
N
0.700
ENSPPYG00000012353
Pongo pygmaeus
ENSPPYG00000012353
N
0.700
PNO1_CHICK
Gallus gallus
ENSGALG00000009093
N
0.700
Ame_R013855
Ailuropoda melanoleuca
Ame_R013855
N
0.700
AT3G13230
Arabidopsis thaliana
AT3G13230-TAIR-G
N
0.700
PNO1_BOVIN
Bos taurus
ENSBTAG00000010604
N
0.700
PNO1
Canis familiaris
ENSCAFG00000003256
N
0.700
PMAA_046470
Penicillium marneffei
PMAA_046470
N
0.700
AAH42279
Xenopus laevis
AAH42279
N
0.700
Q8AVH4
Xenopus laevis
Q8AVH4
N
0.700
RO3G_00885
Rhizopus oryzae
RO3G_00885
N
0.700
RO3G_05288
Rhizopus oryzae
RO3G_05288
N
0.700
AAQ24169
Xenopus laevis
AAQ24169
N
0.700
LOC100389955
Callithrix jacchus
ENSCJAG00000006564
N
0.700
PNO1
Cavia porcellus
ENSCPOG00000010130
N
0.700
PNO1
Loxodonta africana
ENSLAFG00000000046
N
0.700
PNO1
Macropus eugenii
ENSMEUG00000004504
N
0.700
PNO1
Meleagris gallopavo
ENSMGAG00000004514
N
0.700
PNO1
Microcebus murinus
ENSMICG00000010897
N
0.700
PNO1
Gorilla gorilla
ENSGGOG00000009158
N
0.700
PNO1
Homo sapiens
ENSG00000115946
N
0.700
pno1
Danio rerio
ENSDARG00000008502
N
0.700
Pno1
Dipodomys ordii
ENSDORG00000006867
N
0.700
LOC100061904
Equus caballus
ENSECAG00000011263
N
0.700
PNO1
Erinaceus europaeus
ENSEEUG00000009611
N
0.700
PNO1
Myotis lucifugus
ENSMLUG00000010850
N
0.700