CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAH41273
(
Xenopus laevis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
AAH41273
T22112_0.6
Xenbase (2010-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH41273
KH
154
209
KRRQRLLGPKGSTLKALELLTNCYIMVQGNTVSALGPFGGLKEVRKVVSDTMKNIH
Links
Other
KH
family RBPs
Other
Xenopus laevis
RBPs
54 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAH72210
Xenopus laevis
AAH72210
N
0.982
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.862
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.839
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.793
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.793
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.793
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.793
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.776
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.776
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.776
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.776
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.776
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.776
KRR1
Sorex araneus
ENSSARG00000009967
N
0.776
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.776
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.776
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.776
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.776
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.776
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.776
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.776
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.776
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.776
KRR1
Felis catus
ENSFCAG00000005207
N
0.776
KRR1
Danio rerio
ENSDARG00000011246
N
0.776
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.776
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.776
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.776
KRR1
Homo sapiens
ENSG00000111615
N
0.776
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.776
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.776
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.776
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.759
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.759
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.759
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.759
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.759
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.759
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.759
Krr1
Mus musculus
ENSMUSG00000063334
N
0.759
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.724
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.724
85673
Helobdella robusta
85673
N
0.724
ANIA_05875
Aspergillus nidulans
CADANIAG00007161
N
0.724
GSTUMT00008009001
Tuber melanosporum
GSTUMT00008009001
N
0.724
KRR1
Myotis lucifugus
ENSMLUG00000002339
N
0.719
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.714
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.714
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.714
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.714
KRR1
Candida albicans
orf19.661
N
0.714
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.707
An02g03350
Aspergillus niger
CADANGAG00001848
N
0.707
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.707