CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUS
(
Macropus eugenii
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
ENSMEUG00000000968
T25581_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
FUS
M316_0.6
Homo sapiens
GGUG
SELEX
Cook et al.(2011)
637_11098054
0.982
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000000893
RRM
289
367
IFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKDFSGNPIK
ENSMEUP00000000893
RanBP ZF
424
455
RAGDWKCPNPICENMNFSWRNECNQCKAPKPD
Links
Other
RanBP ZF,RRM
family RBPs
Other
Macropus eugenii
RBPs
65 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FUS
Canis familiaris
ENSCAFG00000016862
I
0.991
FUS_BOVIN
Bos taurus
ENSBTAG00000005757
I
0.982
Fus
Mus musculus
ENSMUSG00000030795
I
0.982
FUS
Sus scrofa
ENSSSCG00000007759
I
0.982
FUS
Pan troglodytes
ENSPTRG00000008038
I
0.982
FUS
Anolis carolinensis
ENSACAG00000006776
I
0.982
FUS
Monodelphis domestica
ENSMODG00000001889
I
0.982
FUS
Macaca mulatta
ENSMMUG00000019637
I
0.982
FUS
Homo sapiens
ENSG00000089280
D
0.982
FUS
Gorilla gorilla
ENSGGOG00000003707
I
0.982
FUS
Pteropus vampyrus
ENSPVAG00000003097
I
0.982
FUS
Erinaceus europaeus
ENSEEUG00000004934
I
0.982
LOC100395517
Callithrix jacchus
ENSCJAG00000003169
I
0.982
FUS
Oryctolagus cuniculus
ENSOCUG00000021526
I
0.982
FUS
Ornithorhynchus anatinus
ENSOANG00000005606
I
0.973
Fus
Rattus norvegicus
ENSRNOG00000023360
I
0.973
fus
Xenopus tropicalis
ENSXETG00000001951
I
0.964
AAH44319
Xenopus laevis
AAH44319
I
0.955
AAH74437
Xenopus laevis
AAH74437
I
0.955
D3ZSJ6_RAT
Rattus norvegicus
ENSRNOG00000028611
I
0.946
FUS
Tarsius syrichta
ENSTSYG00000011757
I
0.928
FUS
Loxodonta africana
ENSLAFG00000001643
I
0.901
ENSETEG00000015358
Echinops telfairi
ENSETEG00000015358
I
0.883
FUS
Tetraodon nigroviridis
ENSTNIG00000011303
I
0.883
FUS
Choloepus hoffmanni
ENSCHOG00000010780
I
0.865
FUS
Gasterosteus aculeatus
ENSGACG00000014903
I
0.856
TAF15
Taeniopygia guttata
ENSTGUG00000004702
I
0.784
TAF15
Gallus gallus
ENSGALG00000002060
I
0.784
TAF15
Meleagris gallopavo
ENSMGAG00000003842
I
0.784
TAF15
Macaca mulatta
ENSMMUG00000003305
I
0.757
ENSCJAG00000002807
Callithrix jacchus
ENSCJAG00000002807
I
0.757
TAF15
Canis familiaris
ENSCAFG00000018176
I
0.757
Taf15
Rattus norvegicus
ENSRNOG00000010604
I
0.757
TAF15
Bos taurus
ENSBTAG00000006916
I
0.757
LOC100391580
Callithrix jacchus
ENSCJAG00000014961
I
0.757
TAF15
Myotis lucifugus
ENSMLUG00000002870
I
0.757
TAF15
Gorilla gorilla
ENSGGOG00000005693
I
0.757
TAF15
Loxodonta africana
ENSLAFG00000018332
I
0.757
TAF15
Homo sapiens
ENSG00000172660
I
0.757
TAF15
Oryctolagus cuniculus
ENSOCUG00000002838
I
0.757
LOC100071562
Equus caballus
ENSECAG00000000718
I
0.757
TAF15
Danio rerio
ENSDARG00000070019
I
0.757
Taf15
Mus musculus
ENSMUSG00000020680
I
0.757
TAF15
Procavia capensis
ENSPCAG00000009582
I
0.757
Ame_R012008
Ailuropoda melanoleuca
Ame_R012008
I
0.757
TAF15
Sus scrofa
ENSSSCG00000017707
I
0.757
TAF15
Pan troglodytes
ENSPTRG00000009026
I
0.757
TAF15
Pteropus vampyrus
ENSPVAG00000003952
I
0.757
TAF15
Sorex araneus
ENSSARG00000012092
I
0.757
TAF15
Tursiops truncatus
ENSTTRG00000014145
I
0.757
TAF15
Ornithorhynchus anatinus
ENSOANG00000014273
I
0.748
ENSPPYG00000008194
Pongo pygmaeus
ENSPPYG00000008194
I
0.748
TAF15
Oryzias latipes
ENSORLG00000011382
I
0.748
TAF15
Cavia porcellus
ENSCPOG00000010259
I
0.739
TAF15
Dasypus novemcinctus
ENSDNOG00000006956
I
0.739
TAF15
Tetraodon nigroviridis
ENSTNIG00000004057
I
0.739
TAF15
Takifugu rubripes
ENSTRUG00000007798
I
0.730
AAH77935
Xenopus laevis
AAH77935
I
0.730
ENSPPYG00000007311
Pongo pygmaeus
ENSPPYG00000007311
I
0.730
AAH81071
Xenopus laevis
AAH81071
I
0.721
ENSRNOG00000024836
Rattus norvegicus
ENSRNOG00000024836
I
0.721
ENSMEUG00000008703
Macropus eugenii
ENSMEUG00000008703
N
0.703
ENSMEUG00000013663
Macropus eugenii
ENSMEUG00000013663
N
0.703
TAF15
Macropus eugenii
ENSMEUG00000006009
I
0.703
XM_001364468.1
Monodelphis domestica
ENSMODG00000008679
N
0.703