D3ZSJ6_RAT (Rattus norvegicus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSRNOG00000028611 T25652_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.964
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000030914 RRM 224 302
ENSRNOP00000030914 RanBP ZF 357 388

Links

Other RanBP ZF,RRM family RBPs
Other Rattus norvegicus RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Fus Rattus norvegicus ENSRNOG00000023360 I 0.973
FUS Anolis carolinensis ENSACAG00000006776 I 0.964
FUS Macaca mulatta ENSMMUG00000019637 I 0.964
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.964
FUS Homo sapiens ENSG00000089280 D 0.964
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.964
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.964
FUS Gorilla gorilla ENSGGOG00000003707 I 0.964
FUS Monodelphis domestica ENSMODG00000001889 I 0.964
FUS Pan troglodytes ENSPTRG00000008038 I 0.964
FUS Sus scrofa ENSSSCG00000007759 I 0.964
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.964
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.964
Fus Mus musculus ENSMUSG00000030795 I 0.964
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.964
FUS Canis familiaris ENSCAFG00000016862 I 0.955
FUS Macropus eugenii ENSMEUG00000000968 I 0.946
AAH74437 Xenopus laevis AAH74437 I 0.937
fus Xenopus tropicalis ENSXETG00000001951 I 0.937
AAH44319 Xenopus laevis AAH44319 I 0.928
FUS Tarsius syrichta ENSTSYG00000011757 I 0.901
FUS Loxodonta africana ENSLAFG00000001643 I 0.892
ENSETEG00000015358 Echinops telfairi ENSETEG00000015358 I 0.856
FUS Choloepus hoffmanni ENSCHOG00000010780 I 0.847
FUS Tetraodon nigroviridis ENSTNIG00000011303 I 0.838
FUS Gasterosteus aculeatus ENSGACG00000014903 I 0.820
TAF15 Gallus gallus ENSGALG00000002060 I 0.766
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.766
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.766
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.739
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.739
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.739
Taf15 Mus musculus ENSMUSG00000020680 I 0.739
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.739
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.739
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.739
TAF15 Sus scrofa ENSSSCG00000017707 I 0.739
TAF15 Procavia capensis ENSPCAG00000009582 I 0.739
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.739
Taf15 Rattus norvegicus ENSRNOG00000010604 I 0.739
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.739
LOC100071562 Equus caballus ENSECAG00000000718 I 0.739
TAF15 Homo sapiens ENSG00000172660 I 0.739
TAF15 Canis familiaris ENSCAFG00000018176 I 0.739
TAF15 Danio rerio ENSDARG00000070019 I 0.739
TAF15 Bos taurus ENSBTAG00000006916 I 0.739
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.739
TAF15 Sorex araneus ENSSARG00000012092 I 0.739
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.739
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.739
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.730
TAF15 Oryzias latipes ENSORLG00000011382 I 0.730
TAF15 Takifugu rubripes ENSTRUG00000007798 I 0.721
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.721
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.721
TAF15 Tetraodon nigroviridis ENSTNIG00000004057 I 0.721
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.712
ENSPPYG00000007311 Pongo pygmaeus ENSPPYG00000007311 I 0.712
AAH77935 Xenopus laevis AAH77935 I 0.712
ENSRNOG00000024836 Rattus norvegicus ENSRNOG00000024836 I 0.703
AAH81071 Xenopus laevis AAH81071 I 0.703