AAH74437 (Xenopus laevis)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		AAH74437 T25915_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FUS
M316_0.6 		Homo sapiens GGUG SELEX
Cook et al.(2011)
637_11098054 		0.973
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH74437 RRM 299 377
AAH74437 RanBP ZF 434 465

Links

Other RanBP ZF,RRM family RBPs
Other Xenopus laevis RBPs

66 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44319 Xenopus laevis AAH44319 I 0.991
fus Xenopus tropicalis ENSXETG00000001951 I 0.982
FUS Monodelphis domestica ENSMODG00000001889 I 0.973
FUS Gorilla gorilla ENSGGOG00000003707 I 0.973
FUS Homo sapiens ENSG00000089280 D 0.973
Fus Mus musculus ENSMUSG00000030795 I 0.973
FUS Pan troglodytes ENSPTRG00000008038 I 0.973
FUS Sus scrofa ENSSSCG00000007759 I 0.973
FUS Pteropus vampyrus ENSPVAG00000003097 I 0.973
FUS Erinaceus europaeus ENSEEUG00000004934 I 0.973
FUS Oryctolagus cuniculus ENSOCUG00000021526 I 0.973
FUS Macaca mulatta ENSMMUG00000019637 I 0.973
FUS_BOVIN Bos taurus ENSBTAG00000005757 I 0.973
LOC100395517 Callithrix jacchus ENSCJAG00000003169 I 0.973
FUS Anolis carolinensis ENSACAG00000006776 I 0.973
FUS Canis familiaris ENSCAFG00000016862 I 0.964
Fus Rattus norvegicus ENSRNOG00000023360 I 0.964
FUS Ornithorhynchus anatinus ENSOANG00000005606 I 0.964
FUS Macropus eugenii ENSMEUG00000000968 I 0.955
D3ZSJ6_RAT Rattus norvegicus ENSRNOG00000028611 I 0.937
FUS Tarsius syrichta ENSTSYG00000011757 I 0.919
FUS Loxodonta africana ENSLAFG00000001643 I 0.892
FUS Gasterosteus aculeatus ENSGACG00000014903 I 0.883
FUS Tetraodon nigroviridis ENSTNIG00000011303 I 0.874
ENSETEG00000015358 Echinops telfairi ENSETEG00000015358 I 0.874
FUS Choloepus hoffmanni ENSCHOG00000010780 I 0.865
TAF15 Taeniopygia guttata ENSTGUG00000004702 I 0.793
TAF15 Meleagris gallopavo ENSMGAG00000003842 I 0.793
TAF15 Gallus gallus ENSGALG00000002060 I 0.793
TAF15 Danio rerio ENSDARG00000070019 I 0.775
TAF15 Bos taurus ENSBTAG00000006916 I 0.766
TAF15 Pan troglodytes ENSPTRG00000009026 I 0.766
TAF15 Procavia capensis ENSPCAG00000009582 I 0.766
TAF15 Oryzias latipes ENSORLG00000011382 I 0.766
LOC100071562 Equus caballus ENSECAG00000000718 I 0.766
Taf15 Rattus norvegicus ENSRNOG00000010604 I 0.766
TAF15 Tursiops truncatus ENSTTRG00000014145 I 0.766
TAF15 Sorex araneus ENSSARG00000012092 I 0.766
Ame_R012008 Ailuropoda melanoleuca Ame_R012008 I 0.766
TAF15 Sus scrofa ENSSSCG00000017707 I 0.766
TAF15 Pteropus vampyrus ENSPVAG00000003952 I 0.766
LOC100391580 Callithrix jacchus ENSCJAG00000014961 I 0.766
TAF15 Macaca mulatta ENSMMUG00000003305 I 0.766
TAF15 Oryctolagus cuniculus ENSOCUG00000002838 I 0.766
TAF15 Myotis lucifugus ENSMLUG00000002870 I 0.766
TAF15 Gorilla gorilla ENSGGOG00000005693 I 0.766
TAF15 Loxodonta africana ENSLAFG00000018332 I 0.766
ENSCJAG00000002807 Callithrix jacchus ENSCJAG00000002807 I 0.766
TAF15 Homo sapiens ENSG00000172660 I 0.766
Taf15 Mus musculus ENSMUSG00000020680 I 0.766
TAF15 Canis familiaris ENSCAFG00000018176 I 0.766
ENSPPYG00000008194 Pongo pygmaeus ENSPPYG00000008194 I 0.748
TAF15 Dasypus novemcinctus ENSDNOG00000006956 I 0.748
TAF15 Ornithorhynchus anatinus ENSOANG00000014273 I 0.748
TAF15 Tetraodon nigroviridis ENSTNIG00000004057 I 0.748
ENSPPYG00000007311 Pongo pygmaeus ENSPPYG00000007311 I 0.739
TAF15 Cavia porcellus ENSCPOG00000010259 I 0.739
TAF15 Takifugu rubripes ENSTRUG00000007798 I 0.739
AAH81071 Xenopus laevis AAH81071 I 0.739
AAH77935 Xenopus laevis AAH77935 I 0.730
ENSRNOG00000024836 Rattus norvegicus ENSRNOG00000024836 I 0.721
TAF15 Monodelphis domestica ENSMODG00000019123 I 0.712
ENSMEUG00000013663 Macropus eugenii ENSMEUG00000013663 N 0.712
TAF15 Macropus eugenii ENSMEUG00000006009 I 0.712
ENSMEUG00000008703 Macropus eugenii ENSMEUG00000008703 N 0.712
XM_001364468.1 Monodelphis domestica ENSMODG00000008679 N 0.703