CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF15173
(
Drosophila ananassae
)
RanBP ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1)
IPR001876
IPR000504
FBgn0092198
T25694_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0118365
RRM
172
244
IIIFGLKKHITEADIMGELIKVNLEPASIRVMRKKPTGASRCFAFVEFKTVEEAKQWMDLTQGVLQLGDHRVA
FBpp0118365
RanBP ZF
251
280
RISDWTCFKCGASNFKRRFQCFVCSSARSE
FBpp0118365
RRM
303
368
IMLRNLDALTNEEGVLTALQKHLPKLAKTVSKVLISRDTLTQASRGICYLHFDTLVDSMEVYNGLT
Links
Other
RanBP ZF,RRM
family RBPs
Other
Drosophila ananassae
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GK14959
Drosophila willistoni
FBgn0216964
N
0.820
GI14534
Drosophila mojavensis
FBgn0137286
N
0.803
GJ16951
Drosophila virilis
FBgn0204129
N
0.790
GA18503-RA
Drosophila pseudoobscura
FBgn0078505
N
0.786
GL15618
Drosophila persimilis
FBgn0153222
N
0.786
GH11401
Drosophila grimshawi
FBgn0118881
N
0.783
GL15620
Drosophila persimilis
FBgn0153224
N
0.783
GE17429
Drosophila yakuba
FBgn0234896
N
0.781
GF15172
Drosophila ananassae
FBgn0092197
N
0.771
GG24776
Drosophila erecta
FBgn0116906
N
0.768
GG24777
Drosophila erecta
FBgn0116907
N
0.757
GE17418
Drosophila yakuba
FBgn0234885
N
0.754
CG4896
Drosophila melanogaster
FBgn0031319
N
0.722
GD23080
Drosophila simulans
FBgn0194470
N
0.722
GM16804
Drosophila sechellia
FBgn0171717
N
0.722
GM16803
Drosophila sechellia
FBgn0171716
N
0.715
CG4887
Drosophila melanogaster
FBgn0031318
N
0.715