CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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UREG_05625
(
Uncinocarpus reesii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
UREG_05625
T31358_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
URET_05625
RRM
296
366
VYVGRIPHGFYEHEMRAYFSQFGEIKYLRLARNRTTGRSRHHGFIQFASESVAKIVADTMNNYLMFGHILK
Links
Other
RRM
family RBPs
Other
Uncinocarpus reesii
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPSG_03082
Coccidioides posadasii
CPSG_03082
N
0.845
CIMG_04180
Coccidioides immitis
CIMG_04180
N
0.845
PABG_04180
Paracoccidioides brasiliensis
PABG_04180
N
0.817
BDBG_06195
Blastomyces dermatitidis
BDBG_06195
N
0.817
ATEG_05588
Aspergillus terreus
CADATEAG00005000
N
0.803
MGYG_01823
Microsporum gypseum
MGYG_01823
N
0.803
PMAA_027560
Penicillium marneffei
PMAA_027560
N
0.803
An04g00680
Aspergillus niger
CADANGAG00003776
N
0.803
ANIA_04346
Aspergillus nidulans
CADANIAG00006114
N
0.803
ARB_01674
Arthroderma benhamiae
ARB_01674
N
0.789
TEQG_06916
Trichophyton equinum
TEQG_06916
N
0.789
TESG_01475
Trichophyton tonsurans
TESG_01475
N
0.789
AFLA_113610
Aspergillus flavus
CADAFLAG00005095
N
0.789
TRV_00034
Trichophyton verrucosum
TRV_00034
N
0.789
fgenesh1_pm.00609_#_590
Aspergillus carbonarius
fgenesh1_pm.00609_#_590
N
0.789
AO090023000955
Aspergillus oryzae
CADAORAG00008034
N
0.789
TERG_07689
Trichophyton rubrum
TERG_07689
N
0.789
AFUA_4G06350
Aspergillus fumigatus
CADAFUAG00008260
N
0.775
NFIA_109800
Neosartorya fischeri
CADNFIAG00009499
N
0.775
ACLA_045660
Aspergillus clavatus
CADACLAG00004652
N
0.775
MCYG_01275
Microsporum canis
MCYG_01275
N
0.775
Pc22g17020
Penicillium chrysogenum
Pc22g17020
N
0.761
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.732
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.704