TRV_00034 (Trichophyton verrucosum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 TRV_00034 T31197_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TRV_00034 RRM 234 304

Links

Other RRM family RBPs
Other Trichophyton verrucosum RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TERG_07689 Trichophyton rubrum TERG_07689 N 1.000
ARB_01674 Arthroderma benhamiae ARB_01674 N 1.000
TEQG_06916 Trichophyton equinum TEQG_06916 N 1.000
TESG_01475 Trichophyton tonsurans TESG_01475 N 1.000
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.972
MCYG_01275 Microsporum canis MCYG_01275 N 0.944
An04g00680 Aspergillus niger CADANGAG00003776 N 0.859
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.859
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.859
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.845
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.845
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.845
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.831
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.831
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.831
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.831
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.831
PMAA_027560 Penicillium marneffei PMAA_027560 N 0.817
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.789
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.789
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.789
UREG_05625 Uncinocarpus reesii UREG_05625 N 0.789
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.775
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.761
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.761
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.746
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.746
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.746
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.732
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.732
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.732
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.732
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.732
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.732
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.718
e_gw1.17.425.1 Trichoderma virens e_gw1.17.425.1 N 0.718
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.718
e_gw1.1.997.1 Trichoderma reesei e_gw1.1.997.1 N 0.718
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.718
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.704