CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_01275
(
Microsporum canis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MCYG_01275
T29677_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_01275T0
RRM
229
299
VYVGRIPHGFYEDEMRAYFSQFGDISRLRLSRNRTTGKSKHYAFVEFTSTSVAKIVAAAMQNYLMFGHILK
Links
Other
RRM
family RBPs
Other
Microsporum canis
RBPs
42 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TEQG_06916
Trichophyton equinum
TEQG_06916
N
0.944
TERG_07689
Trichophyton rubrum
TERG_07689
N
0.944
TRV_00034
Trichophyton verrucosum
TRV_00034
N
0.944
ARB_01674
Arthroderma benhamiae
ARB_01674
N
0.944
MGYG_01823
Microsporum gypseum
MGYG_01823
N
0.944
TESG_01475
Trichophyton tonsurans
TESG_01475
N
0.944
An04g00680
Aspergillus niger
CADANGAG00003776
N
0.859
ANIA_04346
Aspergillus nidulans
CADANIAG00006114
N
0.845
AO090023000955
Aspergillus oryzae
CADAORAG00008034
N
0.845
fgenesh1_pm.00609_#_590
Aspergillus carbonarius
fgenesh1_pm.00609_#_590
N
0.845
ATEG_05588
Aspergillus terreus
CADATEAG00005000
N
0.845
AFLA_113610
Aspergillus flavus
CADAFLAG00005095
N
0.845
AFUA_4G06350
Aspergillus fumigatus
CADAFUAG00008260
N
0.831
CPSG_03082
Coccidioides posadasii
CPSG_03082
N
0.817
CIMG_04180
Coccidioides immitis
CIMG_04180
N
0.817
ACLA_045660
Aspergillus clavatus
CADACLAG00004652
N
0.817
PABG_04180
Paracoccidioides brasiliensis
PABG_04180
N
0.803
NFIA_109800
Neosartorya fischeri
CADNFIAG00009499
N
0.803
BDBG_06195
Blastomyces dermatitidis
BDBG_06195
N
0.789
PMAA_027560
Penicillium marneffei
PMAA_027560
N
0.789
GSTUMT00006382001
Tuber melanosporum
GSTUMT00006382001
N
0.775
UREG_05625
Uncinocarpus reesii
UREG_05625
N
0.775
Pc22g17020
Penicillium chrysogenum
Pc22g17020
N
0.761
CC1G_06273
Coprinopsis cinerea
CC1G_06273
N
0.732
YALI0F14245g
Yarrowia lipolytica
YALI0F14245g
N
0.732
e_gw1.1.997.1
Trichoderma reesei
e_gw1.1.997.1
N
0.732
e_gw1.35.197.1
Physcomitrella patens
e_gw1.35.197.1
N
0.732
estExt_fgenesh1_pg.C_90140
Trichoderma atroviride
estExt_fgenesh1_pg.C_90140
N
0.732
e_gw1.17.425.1
Trichoderma virens
e_gw1.17.425.1
N
0.732
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.732
SS1G_03893
Sclerotinia sclerotiorum
SS1G_03893
N
0.718
estExt_fgenesh2_pg.C_120136
Selaginella moellendorfii
estExt_fgenesh2_pg.C_120136
N
0.718
SPPG_07834
Spizellomyces punctatus
SPPG_07834
N
0.718
estExt_Genewise1Plus.C_30445
Agaricus bisporus
estExt_Genewise1Plus.C_30445
N
0.718
FGSG_04392
Fusarium graminearum
FGSG_04392
N
0.704
DEHA0A05764g
Debaryomyces hansenii
DEHA0A05764g
N
0.704
augustus-scaffold_1.g441
Schizophyllum commune
augustus-scaffold_1.g441
N
0.704
e_gw1.87.91.1
Postia placenta
e_gw1.87.91.1
N
0.704
gw1.11.214.1
Batrachochytrium dendrobatidis
gw1.11.214.1
N
0.704
gw1.198.122.1
Physcomitrella patens
gw1.198.122.1
N
0.704
estExt_Genewise1Plus.C_200094
Postia placenta
estExt_Genewise1Plus.C_200094
N
0.704
fgenesh1_pg.C_scaffold_4000265
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000265
N
0.704