AGAP002908 (Anopheles gambiae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AGAP002908 T32484_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
U2af50
M078_0.6 		Drosophila melanogaster UUUUUYY RNAcompete
Ray et al.(2013)
RNCMPT00080 		0.909
U2AF2
M077_0.6 		Homo sapiens UUUUUYC RNAcompete
Ray et al.(2013)
RNCMPT00079 		0.793
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AGAP002908-PA RRM 127 201
AGAP002908-PA RRM 241 311
AGAP002908-PA RRM 371 432
AGAP002908-PB RRM 68 130
AGAP002908-PC RRM 52 115
AGAP002908-PC RRM 175 236

Links

Other RRM family RBPs
Other Anopheles gambiae RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL002818 Aedes aegypti AAEL002818 I 0.981
CpipJ_CPIJ012850 Culex pipiens CpipJ_CPIJ012850 I 0.971
CPIJ012850 Culex quinquefasciatus CPIJ012850 I 0.971
amel4_ncbi_hmm5234 Apis mellifera amel4_ncbi_hmm5234 I 0.923
BGIBMGA007082 Bombyx mori BGIBMGA007082 I 0.918
nasonia_NCBI_hmm415104 Nasonia vitripennis nasonia_NCBI_hmm415104 I 0.918
GL15893 Drosophila persimilis FBgn0153497 I 0.909
GG19328 Drosophila erecta FBgn0111532 I 0.909
GF19596 Drosophila ananassae FBgn0096603 I 0.909
GM13406 Drosophila sechellia FBgn0168337 I 0.909
GD24494 Drosophila simulans FBgn0195829 I 0.909
U2af50 Drosophila melanogaster FBgn0005411 D 0.909
GE15975 Drosophila yakuba FBgn0233531 I 0.909
GK10063 Drosophila willistoni FBgn0212078 I 0.909
GA22177-RA Drosophila pseudoobscura FBgn0082156 I 0.909
GI14308 Drosophila mojavensis FBgn0137061 I 0.899
DGIL_AUG5s4302g1t1 Acyrtosiphon pisum DGIL_AUG5s4302g1t1 I 0.899
GH12033 Drosophila grimshawi FBgn0119512 I 0.899
DGIL_AUG5s6719g2t1 Acyrtosiphon pisum DGIL_AUG5s6719g2t1 I 0.894
PHUM460480 Pediculus humanus PHUM460480 I 0.889
DGIL_AUG5s12651g2t1 Acyrtosiphon pisum DGIL_AUG5s12651g2t1 I 0.851
GJ19364 Drosophila virilis FBgn0206507 I 0.846
estExt_Genewise1.C_sca_340148 Lottia gigantea estExt_Genewise1.C_sca_340148 I 0.841
ENSTRUG00000006885 Takifugu rubripes ENSTRUG00000006885 I 0.803
U2AF2 Anolis carolinensis ENSACAG00000015489 I 0.798
ENSMMUG00000004810 Macaca mulatta ENSMMUG00000004810 I 0.793
LOC100050729 Equus caballus ENSECAG00000010110 I 0.793
U2AF2 Homo sapiens ENSG00000063244 D 0.793
ENSLAFG00000018056 Loxodonta africana ENSLAFG00000018056 I 0.793
LOC690372 Rattus norvegicus ENSRNOG00000015914 I 0.793
U2AF2 Pteropus vampyrus ENSPVAG00000004540 I 0.793
U2af2 Mus musculus ENSMUSG00000030435 I 0.793
Ame_R015025 Ailuropoda melanoleuca Ame_R015025 I 0.793
Q24JZ8_BOVIN Bos taurus ENSBTAG00000002830 I 0.793
AAH44032 Xenopus laevis AAH44032 I 0.793
U2AF2 Cavia porcellus ENSCPOG00000001582 I 0.793
u2af2 Xenopus tropicalis ENSXETG00000019128 I 0.793
U2AF2 Tursiops truncatus ENSTTRG00000000987 I 0.793
U2AF2 Canis familiaris ENSCAFG00000002551 I 0.788
ENSGACG00000014500 Gasterosteus aculeatus ENSGACG00000014500 I 0.786
ENSTNIG00000011257 Tetraodon nigroviridis ENSTNIG00000011257 I 0.781
U2AF2 Oryzias latipes ENSORLG00000011545 I 0.774
u2af2a Danio rerio ENSDARG00000012505 I 0.769
U2AF2 Gasterosteus aculeatus ENSGACG00000010632 I 0.769
U2AF2 Takifugu rubripes ENSTRUG00000005514 I 0.769
U2AF2 Tetraodon nigroviridis ENSTNIG00000008106 I 0.769
estExt_Genewise1.C_1170024 Capitella teleta estExt_Genewise1.C_1170024 I 0.769
u2af2b Danio rerio ENSDARG00000011740 I 0.764
Smp_019690 Schistosoma mansoni Smp_019690 I 0.740
CBG15152 Caenorhabditis briggsae CBG15152 I 0.739
LOAG_09095 Loa loa LOAG_09095 N 0.730
185543 Helobdella robusta 185543 I 0.730
ENSCING00000003455 Ciona intestinalis ENSCING00000003455 I 0.729
ENSCSAVG00000006813 Ciona savignyi ENSCSAVG00000006813 I 0.718
fgenesh1_pm.scaffold_8000042 Nematostella vectensis fgenesh1_pm.scaffold_8000042 I 0.708