LOC538435 (Bos taurus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSBTAG00000038680 T34952_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA2B1
M024_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00024 		0.721
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000049138 RRM 2 71
ENSBTAP00000049138 RRM 93 162
ENSBTAP00000049936 RRM 37 106
ENSBTAP00000049936 RRM 128 197
ENSBTAP00000050493 RRM 68 137
ENSBTAP00000050493 RRM 159 228

Links

Other RRM family RBPs
Other Bos taurus RBPs

53 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSBTAG00000020849 Bos taurus ENSBTAG00000020849 I 0.800
ENSBTAG00000011195 Bos taurus ENSBTAG00000011195 I 0.800
ENSSSCG00000013557 Sus scrofa ENSSSCG00000013557 I 0.771
ENSSSCG00000013561 Sus scrofa ENSSSCG00000013561 I 0.771
HNRNPA2B1 Pan troglodytes ENSPTRG00000019002 I 0.769
ENSPPYG00000017715 Pongo pygmaeus ENSPPYG00000017715 I 0.769
HNRNPA2B1 Oryctolagus cuniculus ENSOCUG00000026859 I 0.769
HNRNPA2B1 Anolis carolinensis ENSACAG00000012992 I 0.769
HNRNPA2B1 Pteropus vampyrus ENSPVAG00000006296 I 0.769
Hnrnpa2b1 Rattus norvegicus ENSRNOG00000011175 I 0.769
HNRNPA2B1 Tursiops truncatus ENSTTRG00000000709 I 0.769
HNRNPA2B1 Macaca mulatta ENSMMUG00000003619 I 0.769
ROA2_BOVIN Bos taurus ENSBTAG00000005726 I 0.769
Ame_R000626 Ailuropoda melanoleuca Ame_R000626 I 0.769
ENSSTOG00000006202 Spermophilus tridecemlineatus ENSSTOG00000006202 I 0.769
Hnrnpa2b1 Mus musculus ENSMUSG00000004980 I 0.769
Hnrnpa2b1 Dipodomys ordii ENSDORG00000005482 I 0.769
HNRNPA2B1 Myotis lucifugus ENSMLUG00000007578 I 0.769
HNRNPA2B1 Echinops telfairi ENSETEG00000018577 I 0.769
HNRNPA2B1 Dasypus novemcinctus ENSDNOG00000012928 I 0.769
ENSCJAG00000021872 Callithrix jacchus ENSCJAG00000021872 I 0.769
HNRNPA2B1 Canis familiaris ENSCAFG00000002885 I 0.769
LOC100401647 Callithrix jacchus ENSCJAG00000007908 I 0.769
HNRNPA2B1 Homo sapiens ENSG00000122566 D 0.769
LOC100068539 Equus caballus ENSECAG00000000782 I 0.769
HNRNPA2B1 Gorilla gorilla ENSGGOG00000017072 I 0.769
HNRNPA2B1 Loxodonta africana ENSLAFG00000006902 I 0.769
HNRNPA2B1 Meleagris gallopavo ENSMGAG00000010635 I 0.762
HNRNPA2B1 Choloepus hoffmanni ENSCHOG00000013832 I 0.762
HNRNPA2B1 Monodelphis domestica ENSMODG00000000603 I 0.762
HNRNPA2B1 Ornithorhynchus anatinus ENSOANG00000009159 I 0.762
ENSMEUG00000014479 Macropus eugenii ENSMEUG00000014479 I 0.762
Q5ZME1_CHICK Gallus gallus ENSGALG00000011036 I 0.762
ENSMEUG00000001084 Macropus eugenii ENSMEUG00000001084 I 0.762
LOC516616 Bos taurus ENSBTAG00000002284 I 0.755
HNRNPA2B1 Taeniopygia guttata ENSTGUG00000002869 I 0.755
ENSSSCG00000015836 Sus scrofa ENSSSCG00000015836 I 0.755
ENSSTOG00000009092 Spermophilus tridecemlineatus ENSSTOG00000009092 I 0.755
ENSSSCG00000013607 Sus scrofa ENSSSCG00000013607 I 0.748
D4A1X0_RAT Rattus norvegicus ENSRNOG00000021254 I 0.738
hnrnpa2b1 Xenopus tropicalis ENSXETG00000012170 I 0.727
ENSSSCG00000016710 Sus scrofa ENSSSCG00000016710 I 0.722
AAA49948 Xenopus laevis AAA49948 I 0.720
CBU92450 Xenopus laevis CBU92450 I 0.720
P51989 Xenopus laevis P51989 I 0.720
AAH46692 Xenopus laevis AAH46692 I 0.720
CBF67577 Xenopus laevis CBF67577 I 0.720
P51990 Xenopus laevis P51990 I 0.706
HNRNPA2B1 Vicugna pacos ENSVPAG00000010417 I 0.706
AAI06633 Xenopus laevis AAI06633 I 0.706
AAH43750 Xenopus laevis AAH43750 I 0.706
AAB59951 Xenopus laevis AAB59951 I 0.706