Q8MY63_CIOSA (Ciona savignyi)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCSAVG00000003324 T35964_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000005567 RRM 104 173

Links

Other RRM family RBPs
Other Ciona savignyi RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000013568 Ciona intestinalis ENSCING00000013568 N 0.914
THOC4 Pteropus vampyrus ENSPVAG00000017866 N 0.771
Thoc4 Rattus norvegicus ENSRNOG00000036687 N 0.771
THOC4 Pan troglodytes ENSPTRG00000009774 N 0.771
ENSPPYG00000008749 Pongo pygmaeus ENSPPYG00000008749 N 0.771
THOC4 Otolemur garnettii ENSOGAG00000012409 N 0.771
Q6GLW1 Xenopus laevis Q6GLW1 N 0.771
ENSTBEG00000005834 Tupaia belangeri ENSTBEG00000005834 N 0.771
Q58EA2 Xenopus laevis Q58EA2 N 0.771
AAH74336 Xenopus laevis AAH74336 N 0.771
Ame_R000656 Ailuropoda melanoleuca Ame_R000656 N 0.771
thoc4 Xenopus tropicalis ENSXETG00000005391 N 0.771
THOC4 Tursiops truncatus ENSTTRG00000012275 N 0.771
THOC4 Anolis carolinensis ENSACAG00000010526 N 0.771
AAH92013 Xenopus laevis AAH92013 N 0.771
tho4 Danio rerio ENSDARG00000077732 N 0.771
Thoc4 Mus musculus ENSMUSG00000025134 N 0.771
THOC4 Canis familiaris ENSCAFG00000005877 N 0.771
THOC4 Gallus gallus ENSGALG00000007237 N 0.771
THOC4 Homo sapiens ENSG00000183684 N 0.771
THOC4 Echinops telfairi ENSETEG00000016596 N 0.771
LOC100055097 Equus caballus ENSECAG00000018754 N 0.771
THOC4 Cavia porcellus ENSCPOG00000013710 N 0.771
THOC4 Gorilla gorilla ENSGGOG00000013935 N 0.771
THOC4 Loxodonta africana ENSLAFG00000003083 N 0.771
THOC4 Monodelphis domestica ENSMODG00000003030 N 0.771
THOC4 Macaca mulatta ENSMMUG00000012884 N 0.771
THOC4_BOVIN Bos taurus ENSBTAG00000008498 N 0.771
ENSMGAG00000005389 Meleagris gallopavo ENSMGAG00000005389 N 0.771
THOC4 Microcebus murinus ENSMICG00000017403 N 0.771
ISCW001860 Ixodes scapularis ISCW001860 N 0.757
amel4_ncbi_hmm10980 Apis mellifera amel4_ncbi_hmm10980 N 0.757
THOC4 Tetraodon nigroviridis ENSTNIG00000011595 N 0.757
THOC4 Oryzias latipes ENSORLG00000012331 N 0.743
ENSCJAG00000021543 Callithrix jacchus ENSCJAG00000021543 N 0.743
BGIBMGA005323 Bombyx mori BGIBMGA005323 N 0.743
Refbp2 Mus musculus ENSMUSG00000060244 N 0.729
THOC4 Erinaceus europaeus ENSEEUG00000010164 N 0.729
ENSMLUG00000009555 Myotis lucifugus ENSMLUG00000009555 N 0.729
THOC4 Gasterosteus aculeatus ENSGACG00000013328 N 0.729
AGAP006733 Anopheles gambiae AGAP006733 N 0.714
ENSTRUG00000003051 Takifugu rubripes ENSTRUG00000003051 N 0.714
GL12678 Drosophila persimilis FBgn0150284 N 0.714
e_gw.5.817.1 Branchiostoma floridae e_gw.5.817.1 N 0.714
e_gw.394.68.1 Branchiostoma floridae e_gw.394.68.1 N 0.714
XP_001185635.1 Strongylocentrotus purpuratus XP_001185635.1 N 0.714
XP_782040.2 Strongylocentrotus purpuratus XP_782040.2 N 0.714
GA10707-RA Drosophila pseudoobscura FBgn0070763 N 0.714
THOC4 Takifugu rubripes ENSTRUG00000008828 N 0.700
Gm5699 Mus musculus ENSMUSG00000087346 N 0.700
Aqu1.225634 Amphimedon queenslandica Aqu1.225634 N 0.700
ENSGACG00000018178 Gasterosteus aculeatus ENSGACG00000018178 N 0.700