CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSFCAG00000007908
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000007908
T37092_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000007323
RRM
20
72
LFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAXXX
ENSFCAP00000007323
RRM
302
372
IFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
41 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF3
Tupaia belangeri
ENSTBEG00000010130
I
0.938
ENSGGOG00000023049
Gorilla gorilla
ENSGGOG00000023049
I
0.864
CELF3
Ornithorhynchus anatinus
ENSOANG00000004406
N
0.816
CELF3
Takifugu rubripes
ENSTRUG00000012064
I
0.793
CELF5
Macaca mulatta
ENSMMUG00000015513
I
0.758
CELF6
Monodelphis domestica
ENSMODG00000001784
I
0.736
CELF6
Gasterosteus aculeatus
ENSGACG00000016626
I
0.729
CELF6
Oryzias latipes
ENSORLG00000013392
I
0.729
CELF6
Ornithorhynchus anatinus
ENSOANG00000011308
I
0.721
CELF6
Takifugu rubripes
ENSTRUG00000012391
I
0.721
CELF5
Tetraodon nigroviridis
ENSTNIG00000010634
I
0.721
CELF5
Takifugu rubripes
ENSTRUG00000017937
I
0.721
A5A2G4_CHICK
Gallus gallus
ENSGALG00000001966
I
0.721
GL21647
Drosophila persimilis
FBgn0159240
I
0.719
AAEL014033
Aedes aegypti
AAEL014033
I
0.714
AGAP004950
Anopheles gambiae
AGAP004950
I
0.714
CELF5
Gasterosteus aculeatus
ENSGACG00000012870
I
0.714
GA28624-RA
Drosophila pseudoobscura
FBgn0249984
I
0.714
GK17101
Drosophila willistoni
FBgn0219100
I
0.707
bru-3
Drosophila melanogaster
FBgn0262350
D
0.707
GD12651
Drosophila simulans
FBgn0184378
I
0.707
GM24582
Drosophila sechellia
FBgn0179445
I
0.707
GG13757
Drosophila erecta
FBgn0106020
I
0.707
A5A2G2_CHICK
Gallus gallus
ENSGALG00000002413
I
0.707
BRUNOL4
Taeniopygia guttata
ENSTGUG00000001649
I
0.707
CELF6
Ochotona princeps
ENSOPRG00000019169
I
0.707
GF10965
Drosophila ananassae
FBgn0088005
I
0.707
GE20053
Drosophila yakuba
FBgn0237378
I
0.707
PHUM315130
Pediculus humanus
PHUM315130
I
0.700
LOC100414308
Callithrix jacchus
ENSCJAG00000018355
I
0.700
CELF5
Callithrix jacchus
ENSCJAG00000014799
I
0.700
CELF5
Cavia porcellus
ENSCPOG00000005740
I
0.700
GI13095
Drosophila mojavensis
FBgn0135852
I
0.700
CELF6
Pan troglodytes
ENSPTRG00000034360
I
0.700
HEXA
Macaca mulatta
ENSMMUG00000010687
I
0.700
CELF5
Monodelphis domestica
ENSMODG00000019151
I
0.700
CELF4
Loxodonta africana
ENSLAFG00000021352
I
0.700
BRUNOL6
Homo sapiens
ENSG00000140488
D
0.700
Celf6
Mus musculus
ENSMUSG00000032297
I
0.700
GH14684
Drosophila grimshawi
FBgn0122160
I
0.700
GJ13842
Drosophila virilis
FBgn0201061
I
0.700