CELF5 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000005740 T35781_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.830
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000005177 RRM 24 92
ENSCPOP00000005177 RRM 290 360

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.993
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.972
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.971
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.950
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.950
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.900
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.900
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.893
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.893
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.886
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.886
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.886
PHUM315130 Pediculus humanus PHUM315130 I 0.879
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.871
CELF6 Oryzias latipes ENSORLG00000013392 I 0.864
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.864
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.857
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.857
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.857
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.850
GK17101 Drosophila willistoni FBgn0219100 I 0.850
AGAP004950 Anopheles gambiae AGAP004950 I 0.850
AAEL014033 Aedes aegypti AAEL014033 I 0.850
GM24582 Drosophila sechellia FBgn0179445 I 0.843
GD12651 Drosophila simulans FBgn0184378 I 0.843
GE20053 Drosophila yakuba FBgn0237378 I 0.843
bru-3 Drosophila melanogaster FBgn0262350 D 0.843
GG13757 Drosophila erecta FBgn0106020 I 0.843
GF10965 Drosophila ananassae FBgn0088005 I 0.843
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.836
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.836
GJ13842 Drosophila virilis FBgn0201061 I 0.836
Celf6 Mus musculus ENSMUSG00000032297 I 0.836
GI13095 Drosophila mojavensis FBgn0135852 I 0.836
GH14684 Drosophila grimshawi FBgn0122160 I 0.836
HEXA Macaca mulatta ENSMMUG00000010687 I 0.829
BRUNOL6 Homo sapiens ENSG00000140488 D 0.829
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.829
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.829
GL21647 Drosophila persimilis FBgn0159240 I 0.814
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.807
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.807
Smp_041280 Schistosoma mansoni Smp_041280 I 0.800
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.800
LOAG_05508 Loa loa LOAG_05508 I 0.800
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.793
CELF5 Felis catus ENSFCAG00000007127 N 0.786
62054 Helobdella robusta 62054 I 0.757
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.750
Smp_131780 Schistosoma mansoni Smp_131780 I 0.750
90208 Helobdella robusta 90208 I 0.745
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.743
CJA07020 Caenorhabditis japonica CJA07020 I 0.736
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.729
CELF5 Microcebus murinus ENSMICG00000003506 N 0.702
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.700
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.700