CELF5 (Gasterosteus aculeatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGACG00000012870 T37501_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.857
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000017005 RRM 4 72
ENSGACP00000017005 RRM 294 364

Links

Other RRM family RBPs
Other Gasterosteus aculeatus RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.993
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.993
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.900
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.900
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.893
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.893
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.887
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.886
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.886
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.879
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.871
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.864
AAEL014033 Aedes aegypti AAEL014033 I 0.864
PHUM315130 Pediculus humanus PHUM315130 I 0.864
AGAP004950 Anopheles gambiae AGAP004950 I 0.864
GG13757 Drosophila erecta FBgn0106020 I 0.857
GF10965 Drosophila ananassae FBgn0088005 I 0.857
bru-3 Drosophila melanogaster FBgn0262350 D 0.857
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.857
GE20053 Drosophila yakuba FBgn0237378 I 0.857
GK17101 Drosophila willistoni FBgn0219100 I 0.857
GD12651 Drosophila simulans FBgn0184378 I 0.857
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.857
GM24582 Drosophila sechellia FBgn0179445 I 0.857
CELF6 Oryzias latipes ENSORLG00000013392 I 0.857
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.857
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.850
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.850
GJ13842 Drosophila virilis FBgn0201061 I 0.850
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.850
GI13095 Drosophila mojavensis FBgn0135852 I 0.850
GH14684 Drosophila grimshawi FBgn0122160 I 0.850
GL21647 Drosophila persimilis FBgn0159240 I 0.843
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.836
Smp_041280 Schistosoma mansoni Smp_041280 I 0.829
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.829
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.807
Celf6 Mus musculus ENSMUSG00000032297 I 0.807
LOAG_05508 Loa loa LOAG_05508 I 0.807
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.807
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.800
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.800
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.800
BRUNOL6 Homo sapiens ENSG00000140488 D 0.800
HEXA Macaca mulatta ENSMMUG00000010687 I 0.800
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.786
Smp_131780 Schistosoma mansoni Smp_131780 I 0.779
62054 Helobdella robusta 62054 I 0.750
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.750
90208 Helobdella robusta 90208 I 0.745
CJA07020 Caenorhabditis japonica CJA07020 I 0.743
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.729
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.729
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.714
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.714
CELF5 Felis catus ENSFCAG00000007127 N 0.700
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.700
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.700
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.700
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.700
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.700