CELF6 (Ochotona princeps)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOPRG00000019169 T40066_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.829
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000016048 RRM 4 71
ENSOPRP00000016048 RRM 253 323

Links

Other RRM family RBPs
Other Ochotona princeps RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.993
HEXA Macaca mulatta ENSMMUG00000010687 I 0.993
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.986
BRUNOL6 Homo sapiens ENSG00000140488 D 0.986
Celf6 Mus musculus ENSMUSG00000032297 I 0.979
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.892
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.850
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.850
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.850
CELF6 Oryzias latipes ENSORLG00000013392 I 0.843
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.843
GK17101 Drosophila willistoni FBgn0219100 I 0.836
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.836
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.836
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.836
PHUM315130 Pediculus humanus PHUM315130 I 0.829
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.829
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.829
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.829
bru-3 Drosophila melanogaster FBgn0262350 D 0.829
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.829
GF10965 Drosophila ananassae FBgn0088005 I 0.829
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.829
GM24582 Drosophila sechellia FBgn0179445 I 0.829
GE20053 Drosophila yakuba FBgn0237378 I 0.829
GD12651 Drosophila simulans FBgn0184378 I 0.829
GG13757 Drosophila erecta FBgn0106020 I 0.829
GI13095 Drosophila mojavensis FBgn0135852 I 0.821
GJ13842 Drosophila virilis FBgn0201061 I 0.821
GH14684 Drosophila grimshawi FBgn0122160 I 0.821
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.820
GL21647 Drosophila persimilis FBgn0159240 I 0.820
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.816
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.814
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.814
AAEL014033 Aedes aegypti AAEL014033 I 0.814
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.814
AGAP004950 Anopheles gambiae AGAP004950 I 0.814
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.814
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.807
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.800
Smp_041280 Schistosoma mansoni Smp_041280 I 0.800
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.793
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.771
LOAG_05508 Loa loa LOAG_05508 I 0.750
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.748
62054 Helobdella robusta 62054 I 0.743
Smp_131780 Schistosoma mansoni Smp_131780 I 0.743
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.736
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.736
CJA07020 Caenorhabditis japonica CJA07020 I 0.729
90208 Helobdella robusta 90208 I 0.709
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.707
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.700
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.700
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.700