RBMY1J (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000226941 T37363_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.986
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.986
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.789
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000250831 RRM 10 79
ENSP00000389621 RRM 10 79
ENSP00000402899 RRM 10 79
ENSP00000405745 RRM 10 79

Links

Other RRM family RBPs
Other Homo sapiens RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMY1F Homo sapiens ENSG00000169800 I 1.000
RBMY1B Homo sapiens ENSG00000242875 I 0.986
RBMY1D Homo sapiens ENSG00000244395 I 0.986
RBMY1E Homo sapiens ENSG00000242389 I 0.986
RBMY1A1 Homo sapiens ENSG00000234414 D 0.986
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.971
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.971
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.971
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.971
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.971
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.957
ENSPTRG00000028821 Pan troglodytes ENSPTRG00000028821 I 0.929
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.789
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.775
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.775
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.775
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.775
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.775
RBMX Homo sapiens ENSG00000147274 D 0.775
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.775
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.775
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.775
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.775
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.775
LOC100054583 Equus caballus ENSECAG00000021380 I 0.775
RBMX Cavia porcellus ENSCPOG00000012164 I 0.775
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.775
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.775
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.775
RBMXL1 Homo sapiens ENSG00000213516 I 0.775
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.775
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.775
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.775
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.775
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.775
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.775
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.775
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.775
Rbmx Mus musculus ENSMUSG00000031134 I 0.775
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.775
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.775
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.775
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.775
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.764
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.761
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.761
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.761
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.761
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.761
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.761
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.761
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.761
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.761
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.746
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.746
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.746
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.746
RBMXL2 Homo sapiens ENSG00000170748 I 0.746
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.746
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.746
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.746
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.732
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.732
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.732
RBMX Pan troglodytes ENSPTRG00000034071 I 0.718
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.718
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.718
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.718