ENSPTRG00000028821 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000028821 T40803_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMY1A1
M247_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1053_17318228 		0.943
RBMY1A1
M246_0.6 		Homo sapiens CWCAA SELEX
Cook et al.(2011)
1052_17318228 		0.943
RBMX
M344_0.6 		Homo sapiens CCM SELEX
Cook et al.(2011)
922_19282290 		0.803
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000048412 RRM 10 79

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

71 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q52NW1_PANTR Pan troglodytes ENSPTRG00000028822 I 0.957
XR_020159.1 Pan troglodytes ENSPTRG00000032591 I 0.957
ENSPTRG00000032590 Pan troglodytes ENSPTRG00000032590 I 0.957
XR_020119.1 Pan troglodytes ENSPTRG00000028826 I 0.957
XR_019934.1 Pan troglodytes ENSPTRG00000032589 I 0.957
RBMY1A1 Homo sapiens ENSG00000234414 D 0.943
RBMY1E Homo sapiens ENSG00000242389 I 0.943
RBMY1D Homo sapiens ENSG00000244395 I 0.943
RBMY1B Homo sapiens ENSG00000242875 I 0.943
LOC750990 Pan troglodytes ENSPTRG00000028802 I 0.943
RBMY1J Homo sapiens ENSG00000226941 I 0.929
RBMY1F Homo sapiens ENSG00000169800 I 0.929
RBMX Tarsius syrichta ENSTSYG00000009555 I 0.803
RBMXL1 Oryctolagus cuniculus ENSOCUG00000007220 I 0.789
ENSOANG00000011670 Ornithorhynchus anatinus ENSOANG00000011670 I 0.789
RBMXL1 Homo sapiens ENSG00000213516 I 0.789
RBMXL1 Sus scrofa ENSSSCG00000012703 I 0.789
LOC100054583 Equus caballus ENSECAG00000021380 I 0.789
RBMX Oryctolagus cuniculus ENSOCUG00000024093 I 0.789
Rbmx Rattus norvegicus ENSRNOG00000000866 I 0.789
Q5ZKQ9_CHICK Gallus gallus ENSGALG00000006457 I 0.789
RBMX Meleagris gallopavo ENSMGAG00000003594 I 0.789
RBMXL1 Microcebus murinus ENSMICG00000006856 I 0.789
RBMXL1 Myotis lucifugus ENSMLUG00000013209 I 0.789
Rbmx Mus musculus ENSMUSG00000031134 I 0.789
ENSLAFG00000005568 Loxodonta africana ENSLAFG00000005568 I 0.789
Q2VIN1_9PRIM Gorilla gorilla ENSGGOG00000012016 I 0.789
RBMXL1 Gorilla gorilla ENSGGOG00000027619 I 0.789
ENSOCUG00000028230 Oryctolagus cuniculus ENSOCUG00000028230 I 0.789
RBMX Homo sapiens ENSG00000147274 D 0.789
D3JUI8_BOVIN Bos taurus ENSBTAG00000013308 I 0.789
RBMXL1 Dasypus novemcinctus ENSDNOG00000017199 I 0.789
ENSACAG00000009551 Anolis carolinensis ENSACAG00000009551 I 0.789
RBMX Taeniopygia guttata ENSTGUG00000002135 I 0.789
Ame_R008043 Ailuropoda melanoleuca Ame_R008043 I 0.789
ENSPPYG00000020771 Pongo pygmaeus ENSPPYG00000020771 I 0.789
LOC100406653 Callithrix jacchus ENSCJAG00000003626 I 0.789
RBMX Cavia porcellus ENSCPOG00000012164 I 0.789
HNRPG_PANTR Pan troglodytes ENSPTRG00000000933 I 0.789
ENSPPYG00000001177 Pongo pygmaeus ENSPPYG00000001177 I 0.789
RBMXL1 Tursiops truncatus ENSTTRG00000007322 I 0.789
RBMXL1 Callithrix jacchus ENSCJAG00000032899 I 0.789
RBMXL1 Vicugna pacos ENSVPAG00000005826 I 0.789
RBMXL1 Canis familiaris ENSCAFG00000018962 I 0.778
Rbmxrt Mus musculus ENSMUSG00000037070 I 0.775
ENSMEUG00000015892 Macropus eugenii ENSMEUG00000015892 I 0.775
O97560_MACEU Macropus eugenii ENSMEUG00000013834 I 0.775
Rbmxl2 Mus musculus ENSMUSG00000073894 I 0.775
XM_001367159.1 Monodelphis domestica ENSMODG00000014054 I 0.775
ENSOCUG00000021095 Oryctolagus cuniculus ENSOCUG00000021095 I 0.775
HNRPG_BOVIN Bos taurus ENSBTAG00000036140 I 0.775
HNRPG_BOVIN Bos taurus ENSBTAG00000011807 I 0.775
ENSMUSG00000049235 Mus musculus ENSMUSG00000049235 I 0.775
ENSPPYG00000019152 Pongo pygmaeus ENSPPYG00000019152 I 0.761
Rbmxrtl Rattus norvegicus ENSRNOG00000012138 I 0.761
D4AE41_RAT Rattus norvegicus ENSRNOG00000028858 I 0.761
RBMXL2 Pan troglodytes ENSPTRG00000003312 I 0.761
Rbmxl2 Dipodomys ordii ENSDORG00000010267 I 0.761
D3ZT57_RAT Rattus norvegicus ENSRNOG00000021946 I 0.761
RBMXL2 Homo sapiens ENSG00000170748 I 0.761
ENSLAFG00000014037 Loxodonta africana ENSLAFG00000014037 I 0.761
ENSTTRG00000003238 Tursiops truncatus ENSTTRG00000003238 I 0.746
XR_023586.1 Pan troglodytes ENSPTRG00000004121 I 0.746
ENSLAFG00000022169 Loxodonta africana ENSLAFG00000022169 I 0.746
ENSCJAG00000016247 Callithrix jacchus ENSCJAG00000016247 I 0.732
LOC100415631 Callithrix jacchus ENSCJAG00000022240 I 0.732
ENSDNOG00000009042 Dasypus novemcinctus ENSDNOG00000009042 I 0.732
RBMX Pan troglodytes ENSPTRG00000034071 I 0.732
RBMXL3 Homo sapiens ENSG00000175718 I 0.704
AAH70649 Xenopus laevis AAH70649 I 0.704
ENSLAFG00000020807 Loxodonta africana ENSLAFG00000020807 I 0.704