TIA1 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000015642 T40234_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.927
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.927
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000019581 RRM 9 77
ENSORLP00000019581 RRM 108 178
ENSORLP00000019581 RRM 229 293
ENSORLP00000019585 RRM 9 77
ENSORLP00000019585 RRM 97 167
ENSORLP00000019585 RRM 205 245
ENSORLP00000019589 RRM 9 77
ENSORLP00000019589 RRM 97 167
ENSORLP00000019589 RRM 205 269

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

73 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.951
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.951
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.932
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.932
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.932
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.932
TIA1 Canis familiaris ENSCAFG00000003341 I 0.927
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.927
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.927
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.927
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.927
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.927
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.927
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.927
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.927
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.927
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.927
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.927
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.927
TIA1 Homo sapiens ENSG00000116001 D 0.927
TIA1 Echinops telfairi ENSETEG00000010021 I 0.927
AAH80105 Xenopus laevis AAH80105 I 0.922
tia1 Danio rerio ENSDARG00000052536 I 0.922
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.922
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.922
Tia1 Mus musculus ENSMUSG00000071337 I 0.922
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.917
AAH77169 Xenopus laevis AAH77169 I 0.907
CAC95018 Xenopus laevis CAC95018 I 0.907
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.902
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.883
TIA1 Oryzias latipes ENSORLG00000002529 I 0.883
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.883
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.873
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.873
TIAL1 Homo sapiens ENSG00000151923 D 0.863
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.863
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.863
Tial1 Mus musculus ENSMUSG00000030846 I 0.863
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.863
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.863
TIAL1 Equus caballus ENSECAG00000009970 I 0.863
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.859
tial1 Danio rerio ENSDARG00000009525 I 0.854
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.854
tia1l Danio rerio ENSDARG00000026476 I 0.844
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.835
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.824
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.820
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.797
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.797
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.797
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.797
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.797
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.797
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.797
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.797
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.797
TIA1 Sorex araneus ENSSARG00000001997 I 0.795
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.793
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.773
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.771
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.771
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.766
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.757
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.751
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.750
TIA1 Macropus eugenii ENSMEUG00000013220 I 0.740
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.737
TIA1 Equus caballus ENSECAG00000022361 I 0.717
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.710
TIA1 Procavia capensis ENSPCAG00000001859 I 0.702