AAH80105 (Xenopus laevis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAH80105 T59559_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.941
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.941
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAH80105 RRM 9 77
AAH80105 RRM 108 178
AAH80105 RRM 216 280

Links

Other RRM family RBPs
Other Xenopus laevis RBPs

70 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.995
AAH77169 Xenopus laevis AAH77169 I 0.985
CAC95018 Xenopus laevis CAC95018 I 0.985
Tia1 Mus musculus ENSMUSG00000071337 I 0.946
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.941
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.941
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.941
TIA1 Homo sapiens ENSG00000116001 D 0.941
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.941
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.941
Tia1 Rattus norvegicus ENSRNOG00000016813 I 0.941
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.941
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.941
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.941
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.941
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.941
TIA1 Canis familiaris ENSCAFG00000003341 I 0.937
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.937
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.937
TIA1 Echinops telfairi ENSETEG00000010021 I 0.937
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.937
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.937
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.937
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.932
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.927
tia1 Danio rerio ENSDARG00000052536 I 0.927
TIA1 Oryzias latipes ENSORLG00000015642 I 0.922
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.922
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.922
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.902
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.883
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.878
TIA1 Oryzias latipes ENSORLG00000002529 I 0.878
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.878
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.878
tial1 Danio rerio ENSDARG00000009525 I 0.878
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.868
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.868
TIAL1 Homo sapiens ENSG00000151923 D 0.868
Tial1 Mus musculus ENSMUSG00000030846 I 0.868
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.868
TIAL1 Equus caballus ENSECAG00000009970 I 0.868
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.863
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.859
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.854
tia1l Danio rerio ENSDARG00000026476 I 0.844
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.840
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.839
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.815
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.802
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.802
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.802
TIAL1 Tarsius syrichta ENSTSYG00000004348 I 0.802
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.802
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.802
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.802
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.802
TIA1 Sorex araneus ENSSARG00000001997 I 0.800
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.797
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.797
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.776
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.761
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.761
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.756
TIA1 Vicugna pacos ENSVPAG00000007449 I 0.751
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.750
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.741
TIA1 Equus caballus ENSECAG00000022361 I 0.722
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.720
TIA1 Procavia capensis ENSPCAG00000001859 I 0.707